Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:125761139-125949718

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcnx2 8 125751508 to 125898317 146809 - protein coding gene pecanex homolog 2
Gm39284 8 125774062 to 125790689 16627 + lncRNA gene predicted gene, 39284
Cpgi21288 8 125845333 to 125845596 263 CpG island CpG island 21288
Tssr83478 8 125851127 to 125851136 9 - TSS region transcription start site region 83478
Gm46061 8 125851139 to 125859718 8579 + lncRNA gene predicted gene, 46061
Cpgi21289 8 125897896 to 125898512 616 CpG island CpG island 21289
Tssr83479 8 125898291 to 125898322 31 - TSS region transcription start site region 83479
A730098A19Rik 8 125900119 to 125907972 7853 + antisense lncRNA gene RIKEN cDNA A730098A19 gene
Cpgi21290 8 125909783 to 125911916 2133 CpG island CpG island 21290
Tssr80083 8 125910339 to 125910350 11 + TSS region transcription start site region 80083
Tssr80084 8 125910426 to 125910469 43 + TSS region transcription start site region 80084
Map3k21 8 125910450 to 125947440 36990 + protein coding gene mitogen-activated protein kinase kinase kinase 21
Tssr80085 8 125919142 to 125919149 7 + TSS region transcription start site region 80085
Cpgi21291 8 125934876 to 125935226 350 CpG island CpG island 21291