Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:12554277-12732243

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D630011A20Rik 8 12554272 to 12573320 19048 - bidirectional promoter lncRNA gene RIKEN cDNA D630011A20 gene
Cpgi20102 8 12563044 to 12563292 248 CpG island CpG island 20102
D8Mit141 8 12566166 to 12566402 236 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 141
Tssr76285 8 12572820 to 12572831 11 + TSS region transcription start site region 76285
Tssr76286 8 12573017 to 12573060 43 + TSS region transcription start site region 76286
Spaca7 8 12573029 to 12600744 27715 + protein coding gene sperm acrosome associated 7
Tssr76287 8 12573064 to 12573076 12 + TSS region transcription start site region 76287
Tssr80405 8 12573205 to 12573262 57 - TSS region transcription start site region 80405
Tssr80406 8 12573279 to 12573290 11 - TSS region transcription start site region 80406
Tssr80407 8 12573311 to 12573336 25 - TSS region transcription start site region 80407
Tssr76288 8 12589197 to 12589201 4 + TSS region transcription start site region 76288
Tubgcp3 8 12614277 to 12672243 57966 - protein coding gene tubulin, gamma complex associated protein 3
Tssr2492 8 12647192 to 12647194 2 + TSS region transcription start site region 2492
Gm26483 8 12666095 to 12666198 103 + miRNA gene predicted gene, 26483
Cpgi20103 8 12671591 to 12672735 1144 CpG island CpG island 20103
Tssr80408 8 12672099 to 12672132 33 - TSS region transcription start site region 80408
Tssr80409 8 12672135 to 12672146 11 - TSS region transcription start site region 80409
4931415C17Rik 8 12672391 to 12679238 6847 + lncRNA gene RIKEN cDNA 4931415C17 gene
Tssr2493 8 12672426 to 12672457 31 + TSS region transcription start site region 2493
2810487C13Rik 8 12674307 to 12675247 940 unclassified gene RIKEN cDNA 2810487C13 gene
Gm15348 8 12706944 to 12719127 12183 - lincRNA gene predicted gene 15348