Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:125439790-125699834

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sipa1l2 8 125418063 to 125569808 151745 - protein coding gene signal-induced proliferation-associated 1 like 2
D8Mit324 8 125448050 to 125448160 110 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 324
Tssr83472 8 125474951 to 125474980 29 - TSS region transcription start site region 83472
4930566D17Rik 8 125522492 to 125535725 13233 unclassified non-coding RNA gene RIKEN cDNA 4930566D17 gene
D8Wsu26e 8 125534225 to 125534401 176 DNA segment DNA segment, Chr 8, Wayne State University 26, expressed
Tssr83473 8 125538431 to 125538440 9 - TSS region transcription start site region 83473
Cpgi21284 8 125569122 to 125570671 1549 CpG island CpG island 21284
Tssr2734 8 125569495 to 125569498 3 + TSS region transcription start site region 2734
Tssr83474 8 125569790 to 125569834 44 - TSS region transcription start site region 83474
Tssr80075 8 125584626 to 125584643 17 + TSS region transcription start site region 80075
4930567H12Rik 8 125584638 to 125616670 32032 + lincRNA gene RIKEN cDNA 4930567H12 gene
Tssr80076 8 125584647 to 125584655 8 + TSS region transcription start site region 80076
Cpgi21285 8 125604394 to 125604696 302 CpG island CpG island 21285
Gm30871 8 125657709 to 125667123 9414 - lncRNA gene predicted gene, 30871
D8Ertd620e 8 125661544 to 125661768 224 DNA segment DNA segment, Chr 8, ERATO Doi 620, expressed
Cpgi21286 8 125669353 to 125670558 1205 CpG island CpG island 21286
Tssr83475 8 125669737 to 125669754 17 - TSS region transcription start site region 83475
Map10 8 125669818 to 125673359 3541 + protein coding gene microtubule-associated protein 10
Tssr80077 8 125669828 to 125669875 47 + TSS region transcription start site region 80077
Gm39282 8 125675197 to 125679755 4558 - lncRNA gene predicted gene, 39282
Gm39283 8 125685451 to 125696400 10949 + lncRNA gene predicted gene, 39283
Tssr80078 8 125685611 to 125685635 24 + TSS region transcription start site region 80078
Tssr83476 8 125699477 to 125699486 9 - TSS region transcription start site region 83476