Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:124590366-124792587

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Capn9 8 124576111 to 124618731 42620 + protein coding gene calpain 9
Tssr80033 8 124614181 to 124614219 38 + TSS region transcription start site region 80033
Tssr2733 8 124614559 to 124614581 22 + TSS region transcription start site region 2733
2310022B05Rik 8 124635756 to 124663369 27613 - protein coding gene RIKEN cDNA 2310022B05 gene
Tssr83451 8 124636998 to 124637013 15 - TSS region transcription start site region 83451
Tssr83452 8 124639336 to 124639340 4 - TSS region transcription start site region 83452
Tssr83453 8 124651744 to 124651781 37 - TSS region transcription start site region 83453
Cpgi21271 8 124662497 to 124663857 1360 CpG island CpG island 21271
Tssr83454 8 124663143 to 124663230 87 - TSS region transcription start site region 83454
Tssr83455 8 124663368 to 124663383 15 - TSS region transcription start site region 83455
Tssr83456 8 124663385 to 124663409 24 - TSS region transcription start site region 83456
Tssr83457 8 124663411 to 124663432 21 - TSS region transcription start site region 83457
Ttc13 8 124671332 to 124721983 50651 - protein coding gene tetratricopeptide repeat domain 13
Gm46058 8 124686936 to 124688524 1588 - protein coding gene predicted gene, 46058
Gm30273 8 124690366 to 124692587 2221 - lncRNA gene predicted gene, 30273
Tssr83458 8 124716694 to 124716706 12 - TSS region transcription start site region 83458
Tssr83459 8 124716735 to 124716742 7 - TSS region transcription start site region 83459
Cpgi21272 8 124721475 to 124722685 1210 CpG island CpG island 21272
Tssr83460 8 124721956 to 124721999 43 - TSS region transcription start site region 83460
Arv1 8 124722139 to 124734123 11984 + protein coding gene ARV1 homolog, fatty acid homeostasis modulator
Tssr80034 8 124722145 to 124722187 42 + TSS region transcription start site region 80034
Fam89a 8 124740257 to 124751809 11552 - protein coding gene family with sequence similarity 89, member A
Cpgi21273 8 124751038 to 124752571 1533 CpG island CpG island 21273
Tssr83461 8 124751808 to 124751875 67 - TSS region transcription start site region 83461
Gm9172 8 124765261 to 124766214 953 + pseudogene predicted gene 9172
Cpgi21274 8 124775705 to 124775897 192 CpG island CpG island 21274
Gm45856 8 124781733 to 124782148 415 + pseudogene predicted gene 45856
Cpgi21275 8 124783271 to 124783554 283 CpG island CpG island 21275
Gm46059 8 124785254 to 124792679 7425 - lncRNA gene predicted gene, 46059
Cpgi21276 8 124792157 to 124795118 2961 CpG island CpG island 21276