Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:124400776-124640865

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pgbd5 8 124369049 to 124434462 65413 - protein coding gene piggyBac transposable element derived 5
Tssr83436 8 124406383 to 124406388 5 - TSS region transcription start site region 83436
Cpgi21268 8 124433310 to 124434924 1614 CpG island CpG island 21268
Tssr83437 8 124434323 to 124434372 49 - TSS region transcription start site region 83437
Tssr83438 8 124434442 to 124434505 63 - TSS region transcription start site region 83438
C330016L05Rik 8 124445374 to 124460100 14726 - lncRNA gene RIKEN cDNA C330016L05 gene
Gm30209 8 124460710 to 124468237 7527 - lncRNA gene predicted gene, 30209
D8Mit323 8 124463020 to 124463120 100 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 323
Phdlc2 8 124464422 to 129018580 4554158 QTL plasma HDL cholesterol 2
D8Mit91 8 124464422 to 124464565 143 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 91
Gm39280 8 124508230 to 124512287 4057 - lncRNA gene predicted gene, 39280
Cpgi21269 8 124520504 to 124521329 825 CpG island CpG island 21269
Cog2 8 124520767 to 124552008 31241 + protein coding gene component of oligomeric golgi complex 2
Tssr80030 8 124520776 to 124520865 89 + TSS region transcription start site region 80030
Cpgi21270 8 124530257 to 124530456 199 CpG island CpG island 21270
Agt 8 124556587 to 124569707 13120 - protein coding gene angiotensinogen (serpin peptidase inhibitor, clade A, member 8)
Tssr83439 8 124559308 to 124559317 9 - TSS region transcription start site region 83439
Tssr83440 8 124559319 to 124559329 10 - TSS region transcription start site region 83440
Tssr2731 8 124562826 to 124562832 6 - TSS region transcription start site region 2731
Tssr83441 8 124563766 to 124563777 11 - TSS region transcription start site region 83441
Tssr83442 8 124563871 to 124563905 34 - TSS region transcription start site region 83442
Tssr83443 8 124563930 to 124563938 8 - TSS region transcription start site region 83443
Tssr83444 8 124563941 to 124563955 14 - TSS region transcription start site region 83444
Tssr83445 8 124564180 to 124564193 13 - TSS region transcription start site region 83445
Tssr83446 8 124564346 to 124564361 15 - TSS region transcription start site region 83446
Tssr83447 8 124564448 to 124564482 34 - TSS region transcription start site region 83447
Tssr83448 8 124568869 to 124568873 4 - TSS region transcription start site region 83448
Tssr83449 8 124569696 to 124569714 18 - TSS region transcription start site region 83449
Tssr83450 8 124569845 to 124569867 22 - TSS region transcription start site region 83450
Tssr80031 8 124576075 to 124576090 15 + TSS region transcription start site region 80031
Tssr80032 8 124576105 to 124576126 21 + TSS region transcription start site region 80032
Capn9 8 124576111 to 124618731 42620 + protein coding gene calpain 9
Tssr2732 8 124585327 to 124585329 2 + TSS region transcription start site region 2732
Tssr80033 8 124614181 to 124614219 38 + TSS region transcription start site region 80033
Tssr2733 8 124614559 to 124614581 22 + TSS region transcription start site region 2733
2310022B05Rik 8 124635756 to 124663369 27613 - protein coding gene RIKEN cDNA 2310022B05 gene
Tssr83451 8 124636998 to 124637013 15 - TSS region transcription start site region 83451
Tssr83452 8 124639336 to 124639340 4 - TSS region transcription start site region 83452