Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:123893750-124013753

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acta1 8 123891769 to 123894751 2982 - protein coding gene actin, alpha 1, skeletal muscle
Tssr83408 8 123894744 to 123894760 16 - TSS region transcription start site region 83408
Gm29773 8 123894896 to 123899136 4240 + antisense lncRNA gene predicted gene, 29773
D8Mit121 8 123895364 to 123895615 251 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 121
Orq1 8 123895615 to 71287817 -52607798 QTL ovulation rate QTL 1
W3q5 8 123895615 to 71287817 -52607798 QTL weight 3 weeks QTL 5
Tssr83409 8 123895747 to 123895766 19 - TSS region transcription start site region 83409
Tssr80003 8 123895853 to 123895862 9 + TSS region transcription start site region 80003
Tssr80004 8 123895937 to 123895948 11 + TSS region transcription start site region 80004
Tssr80005 8 123896197 to 123896220 23 + TSS region transcription start site region 80005
Tssr80006 8 123896234 to 123896276 42 + TSS region transcription start site region 80006
Nup133 8 123897123 to 123949265 52142 - protein coding gene nucleoporin 133
Tssr83410 8 123925865 to 123925874 9 - TSS region transcription start site region 83410
Tssr83411 8 123925891 to 123925913 22 - TSS region transcription start site region 83411
Tssr83412 8 123925929 to 123925940 11 - TSS region transcription start site region 83412
Tssr83413 8 123931005 to 123931012 7 - TSS region transcription start site region 83413
Cpgi21263 8 123948742 to 123949870 1128 CpG island CpG island 21263
Gm45890 8 123948790 to 123958935 10145 + antisense lncRNA gene predicted gene 45890
Tssr83414 8 123949201 to 123949287 86 - TSS region transcription start site region 83414
Tssr80007 8 123949410 to 123949437 27 + TSS region transcription start site region 80007
Tssr80008 8 123949446 to 123949465 19 + TSS region transcription start site region 80008
Abcb10 8 123952459 to 123983122 30663 - protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 10
Tssr83415 8 123952868 to 123952874 6 - TSS region transcription start site region 83415
Tssr83416 8 123953750 to 123953753 3 - TSS region transcription start site region 83416
Tssr83417 8 123953770 to 123953776 6 - TSS region transcription start site region 83417
Tssr80009 8 123954010 to 123954041 31 + TSS region transcription start site region 80009
Tssr83418 8 123955769 to 123955773 4 - TSS region transcription start site region 83418
Tssr83419 8 123960191 to 123960211 20 - TSS region transcription start site region 83419
Tssr80010 8 123979296 to 123979302 6 + TSS region transcription start site region 80010
Cpgi21264 8 123982242 to 123983446 1204 CpG island CpG island 21264
Tssr83420 8 123982807 to 123982880 73 - TSS region transcription start site region 83420
Tssr80011 8 123983021 to 123983033 12 + TSS region transcription start site region 80011
Tssr83421 8 123983120 to 123983152 32 - TSS region transcription start site region 83421
Taf5l 8 123996310 to 124021309 24999 - protein coding gene TATA-box binding protein associated factor 5 like
Gm17827 8 124005305 to 124006046 741 + pseudogene predicted gene, 17827