Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:123857296-123927314

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccsap 8 123840844 to 123860209 19365 - protein coding gene centriole, cilia and spindle associated protein
Cpgi21261 8 123858614 to 123860197 1583 CpG island CpG island 21261
Tssr83378 8 123858871 to 123858891 20 - TSS region transcription start site region 83378
Tssr83379 8 123859398 to 123859415 17 - TSS region transcription start site region 83379
Tssr83380 8 123859423 to 123859521 98 - TSS region transcription start site region 83380
Gm9901 8 123859448 to 123860498 1050 + lncRNA gene predicted gene 9901
Tssr83381 8 123859925 to 123859955 30 - TSS region transcription start site region 83381
Tssr83382 8 123859958 to 123859992 34 - TSS region transcription start site region 83382
Gm36896 8 123862785 to 123864541 1756 - lncRNA gene predicted gene, 36896
Tssr83383 8 123883081 to 123883112 31 - TSS region transcription start site region 83383
Acta1 8 123891769 to 123894751 2982 - protein coding gene actin, alpha 1, skeletal muscle
Cpgi21262 8 123891773 to 123893155 1382 CpG island CpG island 21262
Tssr2730 8 123891791 to 123891799 8 - TSS region transcription start site region 2730
Tssr83384 8 123891840 to 123891859 19 - TSS region transcription start site region 83384
Tssr83385 8 123891863 to 123891897 34 - TSS region transcription start site region 83385
Tssr83386 8 123891905 to 123891918 13 - TSS region transcription start site region 83386
Tssr83387 8 123891924 to 123891944 20 - TSS region transcription start site region 83387
Tssr79994 8 123891926 to 123891939 13 + TSS region transcription start site region 79994
Tssr79995 8 123892043 to 123892051 8 + TSS region transcription start site region 79995
Tssr83388 8 123892143 to 123892160 17 - TSS region transcription start site region 83388
Tssr83389 8 123892261 to 123892270 9 - TSS region transcription start site region 83389
Tssr83390 8 123892296 to 123892314 18 - TSS region transcription start site region 83390
Tssr79996 8 123892306 to 123892382 76 + TSS region transcription start site region 79996
Tssr83391 8 123892388 to 123892399 11 - TSS region transcription start site region 83391
Tssr83392 8 123892600 to 123892616 16 - TSS region transcription start site region 83392
Tssr83393 8 123892626 to 123892744 118 - TSS region transcription start site region 83393
Tssr79997 8 123892653 to 123892681 28 + TSS region transcription start site region 79997
Tssr79998 8 123892869 to 123892884 15 + TSS region transcription start site region 79998
Tssr83394 8 123892888 to 123892904 16 - TSS region transcription start site region 83394
Tssr83395 8 123892922 to 123892947 25 - TSS region transcription start site region 83395
Tssr79999 8 123892940 to 123892961 21 + TSS region transcription start site region 79999
Tssr83396 8 123892956 to 123893003 47 - TSS region transcription start site region 83396
Tssr83397 8 123893011 to 123893027 16 - TSS region transcription start site region 83397
Tssr83398 8 123893170 to 123893184 14 - TSS region transcription start site region 83398
Tssr83399 8 123893203 to 123893229 26 - TSS region transcription start site region 83399
Tssr80000 8 123893224 to 123893247 23 + TSS region transcription start site region 80000
Tssr83400 8 123893238 to 123893249 11 - TSS region transcription start site region 83400
Tssr83401 8 123893257 to 123893279 22 - TSS region transcription start site region 83401
Tssr80001 8 123893261 to 123893275 14 + TSS region transcription start site region 80001
Tssr83402 8 123893281 to 123893315 34 - TSS region transcription start site region 83402
Tssr83403 8 123893442 to 123893453 11 - TSS region transcription start site region 83403
Tssr83404 8 123893459 to 123893475 16 - TSS region transcription start site region 83404
Tssr83405 8 123893596 to 123893628 32 - TSS region transcription start site region 83405
Tssr80002 8 123893623 to 123893661 38 + TSS region transcription start site region 80002
Tssr83406 8 123893635 to 123893644 9 - TSS region transcription start site region 83406
Tssr83407 8 123893707 to 123893717 10 - TSS region transcription start site region 83407
Tssr83408 8 123894744 to 123894760 16 - TSS region transcription start site region 83408
Gm29773 8 123894896 to 123899136 4240 + antisense lncRNA gene predicted gene, 29773
D8Mit121 8 123895364 to 123895615 251 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 121
Orq1 8 123895615 to 71287817 -52607798 QTL ovulation rate QTL 1
W3q5 8 123895615 to 71287817 -52607798 QTL weight 3 weeks QTL 5
Tssr83409 8 123895747 to 123895766 19 - TSS region transcription start site region 83409
Tssr80003 8 123895853 to 123895862 9 + TSS region transcription start site region 80003
Tssr80004 8 123895937 to 123895948 11 + TSS region transcription start site region 80004
Tssr80005 8 123896197 to 123896220 23 + TSS region transcription start site region 80005
Tssr80006 8 123896234 to 123896276 42 + TSS region transcription start site region 80006
Nup133 8 123897123 to 123949265 52142 - protein coding gene nucleoporin 133
Tssr83410 8 123925865 to 123925874 9 - TSS region transcription start site region 83410
Tssr83411 8 123925891 to 123925913 22 - TSS region transcription start site region 83411
Tssr83412 8 123925929 to 123925940 11 - TSS region transcription start site region 83412