Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:123624782-123797730

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi21255 8 123628858 to 123629449 591 CpG island CpG island 21255
Gm19600 8 123631028 to 123644623 13595 + lncRNA gene predicted gene, 19600
Tssr79979 8 123631214 to 123631218 4 + TSS region transcription start site region 79979
Gm35930 8 123648292 to 123651835 3543 + lncRNA gene predicted gene, 35930
Tssr79980 8 123649740 to 123649777 37 + TSS region transcription start site region 79980
Gm35874 8 123651026 to 123652736 1710 - lncRNA gene predicted gene, 35874
Cpgi21256 8 123653226 to 123654618 1392 CpG island CpG island 21256
Tssr79981 8 123653791 to 123653805 14 + TSS region transcription start site region 79981
Tssr79982 8 123653807 to 123653818 11 + TSS region transcription start site region 79982
Tssr79983 8 123653823 to 123653834 11 + TSS region transcription start site region 79983
Tssr79984 8 123653841 to 123653877 36 + TSS region transcription start site region 79984
Tssr79985 8 123653903 to 123653908 5 + TSS region transcription start site region 79985
Rhou 8 123653929 to 123663880 9951 + protein coding gene ras homolog family member U
Tssr83373 8 123655323 to 123655324 1 - TSS region transcription start site region 83373
Tssr83374 8 123655565 to 123655578 13 - TSS region transcription start site region 83374
D8Ski14 8 123672380 to 123672583 203 DNA segment DNA segment, Chr 8, Sloan-Kettering Institute 14
Gm35995 8 123694559 to 123696771 2212 - lncRNA gene predicted gene, 35995
Gm39277 8 123709782 to 123712730 2948 + lncRNA gene predicted gene, 39277
Gm36059 8 123716231 to 123718446 2215 - lncRNA gene predicted gene, 36059
Gm39278 8 123724444 to 123725690 1246 - lncRNA gene predicted gene, 39278
Gm45781 8 123727772 to 123735142 7370 - lincRNA gene predicted gene 45781
6030466F02Rik 8 123733958 to 123739941 5983 + lincRNA gene RIKEN cDNA 6030466F02 gene
Tssr79986 8 123738434 to 123738437 3 + TSS region transcription start site region 79986
4732419C18Rik 8 123744631 to 123754726 10095 - lincRNA gene RIKEN cDNA 4732419C18 gene
Tssr83375 8 123751090 to 123751093 3 - TSS region transcription start site region 83375
Tssr83376 8 123754138 to 123754160 22 - TSS region transcription start site region 83376
Tssr79987 8 123754332 to 123754360 28 + TSS region transcription start site region 79987
Gm45866 8 123754370 to 123767721 13351 + lincRNA gene predicted gene 45866
D8Mit277 8 123756975 to 123757075 100 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 277
Gm45865 8 123767551 to 123768495 944 + unclassified gene predicted gene 45865
Gm36188 8 123773770 to 123791079 17309 - lncRNA gene predicted gene, 36188
D8Mit148 8 123778841 to 123779078 237 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 148
Cpgi21257 8 123787584 to 123787787 203 CpG island CpG island 21257
Tssr83377 8 123793918 to 123793922 4 - TSS region transcription start site region 83377