Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:123442707-123542712

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi21251 8 123442841 to 123443551 710 CpG island CpG island 21251
Def8 8 123442956 to 123463899 20943 + protein coding gene differentially expressed in FDCP 8
Tssr79966 8 123442969 to 123443026 57 + TSS region transcription start site region 79966
Tssr79967 8 123443288 to 123443339 51 + TSS region transcription start site region 79967
Tssr2729 8 123443341 to 123443355 14 + TSS region transcription start site region 2729
Tssr79968 8 123447066 to 123447081 15 + TSS region transcription start site region 79968
Tssr79969 8 123452420 to 123452431 11 + TSS region transcription start site region 79969
Tssr79970 8 123452447 to 123452453 6 + TSS region transcription start site region 79970
Tssr79971 8 123454240 to 123454286 46 + TSS region transcription start site region 79971
Tssr79972 8 123454298 to 123454309 11 + TSS region transcription start site region 79972
Gm25428 8 123471384 to 123471497 113 + snoRNA gene predicted gene, 25428
Gm39275 8 123474758 to 123475410 652 - lncRNA gene predicted gene, 39275
Cpgi21252 8 123477160 to 123478514 1354 CpG island CpG island 21252
Tssr79973 8 123477849 to 123477856 7 + TSS region transcription start site region 79973
Tssr79974 8 123477859 to 123477904 45 + TSS region transcription start site region 79974
Afg3l1 8 123477903 to 123503916 26013 + protein coding gene AFG3-like AAA ATPase 1
Tssr79975 8 123477934 to 123477945 11 + TSS region transcription start site region 79975
Tssr79976 8 123478144 to 123478181 37 + TSS region transcription start site region 79976
Tssr79977 8 123492707 to 123492712 5 + TSS region transcription start site region 79977
Dbndd1 8 123504718 to 123515463 10745 - protein coding gene dysbindin (dystrobrevin binding protein 1) domain containing 1
Cpgi21253 8 123514585 to 123515722 1137 CpG island CpG island 21253
Tssr83369 8 123515333 to 123515437 104 - TSS region transcription start site region 83369
Tssr83370 8 123515466 to 123515498 32 - TSS region transcription start site region 83370
1700040B14Rik 8 123518348 to 123518794 446 unclassified gene RIKEN cDNA 1700040B14 gene
Tssr83371 8 123518741 to 123518810 69 - TSS region transcription start site region 83371
Tssr83372 8 123518815 to 123518825 10 - TSS region transcription start site region 83372
Gas8 8 123518834 to 123536650 17816 + protein coding gene growth arrest specific 8
Tssr79978 8 123518843 to 123518928 85 + TSS region transcription start site region 79978
Cpgi21254 8 123518843 to 123519318 475 CpG island CpG island 21254
Gm22314 8 123523260 to 123523540 280 + unclassified non-coding RNA gene predicted gene, 22314
n-R5s100 8 123538786 to 123538904 118 - rRNA gene nuclear encoded rRNA 5S 100
n-R5s101 8 123540493 to 123540611 118 - rRNA gene nuclear encoded rRNA 5S 101
n-R5s102 8 123542178 to 123542296 118 - rRNA gene nuclear encoded rRNA 5S 102