Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:123399298-123509309

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tcf25 8 123373753 to 123403835 30082 + protein coding gene transcription factor 25 (basic helix-loop-helix)
Tssr79956 8 123403539 to 123403576 37 + TSS region transcription start site region 79956
Tssr79957 8 123407093 to 123407114 21 + TSS region transcription start site region 79957
Mc1r 8 123407107 to 123410744 3637 + protein coding gene melanocortin 1 receptor
Gm38092 8 123408100 to 123408752 652 - unclassified gene predicted gene, 38092
Cpgi21250 8 123411043 to 123412012 969 CpG island CpG island 21250
Tssr79958 8 123411544 to 123411562 18 + TSS region transcription start site region 79958
Tubb3 8 123411564 to 123422010 10446 + protein coding gene tubulin, beta 3 class III
Tssr2727 8 123418085 to 123418092 7 + TSS region transcription start site region 2727
Tssr79959 8 123418095 to 123418114 19 + TSS region transcription start site region 79959
Tssr79960 8 123418145 to 123418156 11 + TSS region transcription start site region 79960
Tssr79961 8 123420629 to 123420643 14 + TSS region transcription start site region 79961
Tssr79962 8 123420724 to 123420763 39 + TSS region transcription start site region 79962
Tssr79963 8 123420794 to 123420840 46 + TSS region transcription start site region 79963
Tssr79964 8 123420865 to 123420879 14 + TSS region transcription start site region 79964
Mela 8 123425872 to 123434262 8390 pseudogene melanoma antigen
Tssr83353 8 123426737 to 123426739 2 - TSS region transcription start site region 83353
Tssr2728 8 123427473 to 123427480 7 - TSS region transcription start site region 2728
Tssr83354 8 123427558 to 123427566 8 - TSS region transcription start site region 83354
Tssr83355 8 123427645 to 123427659 14 - TSS region transcription start site region 83355
Tssr83356 8 123427722 to 123427729 7 - TSS region transcription start site region 83356
Tssr83357 8 123427837 to 123427848 11 - TSS region transcription start site region 83357
Tssr83358 8 123428102 to 123428112 10 - TSS region transcription start site region 83358
Tssr79965 8 123428410 to 123428420 10 + TSS region transcription start site region 79965
Tssr83359 8 123428965 to 123428972 7 - TSS region transcription start site region 83359
Tssr83360 8 123429072 to 123429081 9 - TSS region transcription start site region 83360
Tssr83361 8 123429446 to 123429449 3 - TSS region transcription start site region 83361
Tssr83362 8 123429595 to 123429599 4 - TSS region transcription start site region 83362
Tssr83363 8 123432279 to 123432289 10 - TSS region transcription start site region 83363
Tssr83364 8 123432352 to 123432355 3 - TSS region transcription start site region 83364
Tssr83365 8 123432432 to 123432439 7 - TSS region transcription start site region 83365
Tssr83366 8 123432553 to 123432562 9 - TSS region transcription start site region 83366
Tssr83367 8 123432613 to 123432619 6 - TSS region transcription start site region 83367
Tssr83368 8 123432626 to 123432633 7 - TSS region transcription start site region 83368
Cpgi21251 8 123442841 to 123443551 710 CpG island CpG island 21251
Def8 8 123442956 to 123463899 20943 + protein coding gene differentially expressed in FDCP 8
Tssr79966 8 123442969 to 123443026 57 + TSS region transcription start site region 79966
Tssr79967 8 123443288 to 123443339 51 + TSS region transcription start site region 79967
Tssr2729 8 123443341 to 123443355 14 + TSS region transcription start site region 2729
Tssr79968 8 123447066 to 123447081 15 + TSS region transcription start site region 79968
Tssr79969 8 123452420 to 123452431 11 + TSS region transcription start site region 79969
Tssr79970 8 123452447 to 123452453 6 + TSS region transcription start site region 79970
Tssr79971 8 123454240 to 123454286 46 + TSS region transcription start site region 79971
Tssr79972 8 123454298 to 123454309 11 + TSS region transcription start site region 79972
Gm25428 8 123471384 to 123471497 113 + snoRNA gene predicted gene, 25428
Gm39275 8 123474758 to 123475410 652 - lncRNA gene predicted gene, 39275
Cpgi21252 8 123477160 to 123478514 1354 CpG island CpG island 21252
Tssr79973 8 123477849 to 123477856 7 + TSS region transcription start site region 79973
Tssr79974 8 123477859 to 123477904 45 + TSS region transcription start site region 79974
Afg3l1 8 123477903 to 123503916 26013 + protein coding gene AFG3-like AAA ATPase 1
Tssr79975 8 123477934 to 123477945 11 + TSS region transcription start site region 79975
Tssr79976 8 123478144 to 123478181 37 + TSS region transcription start site region 79976
Tssr79977 8 123492707 to 123492712 5 + TSS region transcription start site region 79977
Dbndd1 8 123504718 to 123515463 10745 - protein coding gene dysbindin (dystrobrevin binding protein 1) domain containing 1