Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:122862853-123012883

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdh15 8 122848374 to 122867397 19023 + protein coding gene cadherin 15
Cpgi21235 8 122864717 to 122865427 710 CpG island CpG island 21235
Gm45894 8 122870174 to 122901457 31283 + antisense lncRNA gene predicted gene 45894
Cpgi21236 8 122870370 to 122870938 568 CpG island CpG island 21236
Tssr79900 8 122870569 to 122870600 31 + TSS region transcription start site region 79900
Tssr79901 8 122870606 to 122870622 16 + TSS region transcription start site region 79901
Tssr79902 8 122879274 to 122879281 7 + TSS region transcription start site region 79902
Ankrd11 8 122883822 to 123042277 158455 - protein coding gene ankyrin repeat domain 11
Tssr83303 8 122892832 to 122892854 22 - TSS region transcription start site region 83303
Tssr83304 8 122892995 to 122893026 31 - TSS region transcription start site region 83304
Tssr83305 8 122893592 to 122893623 31 - TSS region transcription start site region 83305
Tssr83306 8 122893942 to 122893970 28 - TSS region transcription start site region 83306
Tssr83307 8 122893982 to 122894013 31 - TSS region transcription start site region 83307
Tssr83308 8 122894061 to 122894083 22 - TSS region transcription start site region 83308
Tssr83309 8 122894501 to 122894522 21 - TSS region transcription start site region 83309
Tssr83310 8 122894600 to 122894614 14 - TSS region transcription start site region 83310
Tssr83311 8 122894783 to 122894807 24 - TSS region transcription start site region 83311
Tssr83312 8 122895201 to 122895222 21 - TSS region transcription start site region 83312
Tssr83313 8 122895758 to 122895772 14 - TSS region transcription start site region 83313
Tssr83314 8 122895912 to 122895933 21 - TSS region transcription start site region 83314
Tssr2720 8 122903128 to 122903132 4 + TSS region transcription start site region 2720
Tssr83315 8 122914144 to 122914172 28 - TSS region transcription start site region 83315
1700123C12Rik 8 122914225 to 122917853 3628 unclassified non-coding RNA gene RIKEN cDNA 1700123C12 gene
Gm39272 8 122936888 to 122944485 7597 + lncRNA gene predicted gene, 39272
Tssr79903 8 122937853 to 122937883 30 + TSS region transcription start site region 79903
Tssr83316 8 122939587 to 122939592 5 - TSS region transcription start site region 83316
Tssr83317 8 122946521 to 122946524 3 - TSS region transcription start site region 83317
Tssr83318 8 122962640 to 122962654 14 - TSS region transcription start site region 83318
Tssr79904 8 122962926 to 122962933 7 + TSS region transcription start site region 79904
Tssr83319 8 122981977 to 122981981 4 - TSS region transcription start site region 83319
Gm24445 8 122982837 to 122982943 106 - snRNA gene predicted gene, 24445
Tssr83320 8 122986846 to 122986850 4 - TSS region transcription start site region 83320
Tssr2721 8 123001197 to 123001202 5 - TSS region transcription start site region 2721