Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:122710493-122882882

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
C230057M02Rik 8 122724948 to 122752325 27377 - lincRNA gene RIKEN cDNA C230057M02 gene
Cpgi21231 8 122751788 to 122752636 848 CpG island CpG island 21231
Tssr83301 8 122752183 to 122752207 24 - TSS region transcription start site region 83301
Tssr83302 8 122752339 to 122752378 39 - TSS region transcription start site region 83302
A530010L16Rik 8 122760034 to 122762866 2832 - lincRNA gene RIKEN cDNA A530010L16 gene
Cpgi21232 8 122769250 to 122769526 276 CpG island CpG island 21232
Gm39271 8 122774035 to 122775423 1388 - bidirectional promoter lncRNA gene predicted gene, 39271
Cpgi21233 8 122775327 to 122776090 763 CpG island CpG island 21233
Tssr2719 8 122775483 to 122775494 11 + TSS region transcription start site region 2719
Acsf3 8 122775493 to 122817882 42389 + protein coding gene acyl-CoA synthetase family member 3
Tssr79896 8 122775497 to 122775514 17 + TSS region transcription start site region 79896
Gm35466 8 122823424 to 122838033 14609 + lncRNA gene predicted gene, 35466
Gm45743 8 122826086 to 122828880 2794 + unclassified gene predicted gene 45743
Gm45893 8 122836551 to 122836797 246 + pseudogene predicted gene 45893
Gm16378 8 122841731 to 122842072 341 + pseudogene predicted gene 16378
Cpgi21234 8 122848269 to 122848556 287 CpG island CpG island 21234
Tssr79897 8 122848367 to 122848400 33 + TSS region transcription start site region 79897
Cdh15 8 122848374 to 122867397 19023 + protein coding gene cadherin 15
Tssr79898 8 122848407 to 122848437 30 + TSS region transcription start site region 79898
Tssr79899 8 122848441 to 122848461 20 + TSS region transcription start site region 79899
Cpgi21235 8 122864717 to 122865427 710 CpG island CpG island 21235
Gm45894 8 122870174 to 122901457 31283 + antisense lncRNA gene predicted gene 45894
Cpgi21236 8 122870370 to 122870938 568 CpG island CpG island 21236
Tssr79900 8 122870569 to 122870600 31 + TSS region transcription start site region 79900
Tssr79901 8 122870606 to 122870622 16 + TSS region transcription start site region 79901
Tssr79902 8 122879274 to 122879281 7 + TSS region transcription start site region 79902