Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:122436094-122523094

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mvd 8 122433601 to 122443422 9821 - protein coding gene mevalonate (diphospho) decarboxylase
Tssr79865 8 122436880 to 122436889 9 + TSS region transcription start site region 79865
Tssr79866 8 122438149 to 122438175 26 + TSS region transcription start site region 79866
Tssr79867 8 122438230 to 122438243 13 + TSS region transcription start site region 79867
Cpgi21218 8 122439400 to 122439714 314 CpG island CpG island 21218
Cpgi21219 8 122442680 to 122444025 1345 CpG island CpG island 21219
Tssr83269 8 122443363 to 122443403 40 - TSS region transcription start site region 83269
Tssr83270 8 122443404 to 122443426 22 - TSS region transcription start site region 83270
Tssr83271 8 122443432 to 122443439 7 - TSS region transcription start site region 83271
Tssr79868 8 122443635 to 122443659 24 + TSS region transcription start site region 79868
9330133O14Rik 8 122443656 to 122446476 2820 + lncRNA gene RIKEN cDNA 9330133O14 gene
Tssr79869 8 122443662 to 122443721 59 + TSS region transcription start site region 79869
Tssr79870 8 122444056 to 122444059 3 + TSS region transcription start site region 79870
Gm20735 8 122445268 to 122451322 6054 - lincRNA gene predicted gene, 20735
Snai3 8 122454208 to 122460733 6525 - protein coding gene snail family zinc finger 3
Cpgi21220 8 122460258 to 122461395 1137 CpG island CpG island 21220
Tssr83272 8 122460666 to 122460695 29 - TSS region transcription start site region 83272
Rnf166 8 122466147 to 122476064 9917 - protein coding gene ring finger protein 166
Tssr79871 8 122470196 to 122470212 16 + TSS region transcription start site region 79871
Tssr79872 8 122470227 to 122470232 5 + TSS region transcription start site region 79872
Gm24366 8 122471627 to 122471712 85 - miRNA gene predicted gene, 24366
Tssr83273 8 122474776 to 122474781 5 - TSS region transcription start site region 83273
Cpgi21221 8 122474984 to 122476687 1703 CpG island CpG island 21221
Tssr83274 8 122475709 to 122475729 20 - TSS region transcription start site region 83274
Tssr83275 8 122476003 to 122476026 23 - TSS region transcription start site region 83275
Tssr83276 8 122476036 to 122476088 52 - TSS region transcription start site region 83276
Ctu2 8 122476094 to 122483094 7000 + protein coding gene cytosolic thiouridylase subunit 2
Tssr83277 8 122476096 to 122476115 19 - TSS region transcription start site region 83277
Tssr79873 8 122476152 to 122476194 42 + TSS region transcription start site region 79873
Tssr79874 8 122476196 to 122476223 27 + TSS region transcription start site region 79874
Piezo1 8 122481698 to 122551329 69631 - protein coding gene piezo-type mechanosensitive ion channel component 1
Cpgi21222 8 122488117 to 122488511 394 CpG island CpG island 21222
Tssr83278 8 122491935 to 122491941 6 - TSS region transcription start site region 83278
Gm26497 8 122520568 to 122520674 106 - snRNA gene predicted gene, 26497