Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:122330042-122520056

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfpm1 8 122282141 to 122337251 55110 + protein coding gene zinc finger protein, multitype 1
Tssr79850 8 122332763 to 122332788 25 + TSS region transcription start site region 79850
Cpgi21215 8 122335404 to 122337362 1958 CpG island CpG island 21215
Tssr79851 8 122335960 to 122335972 12 + TSS region transcription start site region 79851
Gm45353 8 122339171 to 122343100 3929 + lincRNA gene predicted gene 45353
Tssr79852 8 122342450 to 122342459 9 + TSS region transcription start site region 79852
Gm46056 8 122343641 to 122346036 2395 - lncRNA gene predicted gene, 46056
Tssr79853 8 122356236 to 122356245 9 + TSS region transcription start site region 79853
Trhr2 8 122356967 to 122360746 3779 - protein coding gene thyrotropin releasing hormone receptor 2
Gm39270 8 122365059 to 122376483 11424 - lncRNA gene predicted gene, 39270
Gm20681 8 122374037 to 122376444 2407 + lincRNA gene predicted gene 20681
Cpgi21216 8 122376290 to 122377294 1004 CpG island CpG island 21216
Zc3h18 8 122376609 to 122417360 40751 + protein coding gene zinc finger CCCH-type containing 18
Tssr79854 8 122376611 to 122376652 41 + TSS region transcription start site region 79854
Tssr79855 8 122376662 to 122376673 11 + TSS region transcription start site region 79855
Tssr79856 8 122376676 to 122376701 25 + TSS region transcription start site region 79856
Tssr79857 8 122376900 to 122376929 29 + TSS region transcription start site region 79857
Tssr83257 8 122421087 to 122421110 23 - TSS region transcription start site region 83257
Tssr79858 8 122421800 to 122421803 3 + TSS region transcription start site region 79858
Il17c 8 122422085 to 122423639 1554 + protein coding gene interleukin 17C
Tssr79859 8 122424770 to 122424787 17 + TSS region transcription start site region 79859
Cyba 8 122424776 to 122432930 8154 - protein coding gene cytochrome b-245, alpha polypeptide
Tssr79860 8 122424940 to 122424974 34 + TSS region transcription start site region 79860
Tssr83258 8 122424979 to 122424998 19 - TSS region transcription start site region 83258
Tssr83259 8 122425017 to 122425028 11 - TSS region transcription start site region 83259
Tssr83260 8 122425042 to 122425056 14 - TSS region transcription start site region 83260
Tssr83261 8 122425061 to 122425087 26 - TSS region transcription start site region 83261
Tssr83262 8 122426214 to 122426234 20 - TSS region transcription start site region 83262
Tssr83263 8 122426240 to 122426260 20 - TSS region transcription start site region 83263
Tssr83264 8 122426961 to 122426997 36 - TSS region transcription start site region 83264
Tssr83265 8 122427707 to 122427711 4 - TSS region transcription start site region 83265
Tssr79861 8 122430556 to 122430565 9 + TSS region transcription start site region 79861
Tssr79862 8 122431690 to 122431705 15 + TSS region transcription start site region 79862
Tssr79863 8 122431712 to 122431770 58 + TSS region transcription start site region 79863
Tssr2716 8 122431878 to 122431891 13 + TSS region transcription start site region 2716
Tssr83266 8 122432446 to 122432456 10 - TSS region transcription start site region 83266
Cpgi21217 8 122432508 to 122433121 613 CpG island CpG island 21217
Tssr83267 8 122432894 to 122432923 29 - TSS region transcription start site region 83267
Tssr83268 8 122432924 to 122432946 22 - TSS region transcription start site region 83268
Tssr79864 8 122433019 to 122433032 13 + TSS region transcription start site region 79864
Mvd 8 122433601 to 122443422 9821 - protein coding gene mevalonate (diphospho) decarboxylase
Tssr79865 8 122436880 to 122436889 9 + TSS region transcription start site region 79865
Tssr79866 8 122438149 to 122438175 26 + TSS region transcription start site region 79866
Tssr79867 8 122438230 to 122438243 13 + TSS region transcription start site region 79867
Cpgi21218 8 122439400 to 122439714 314 CpG island CpG island 21218
Cpgi21219 8 122442680 to 122444025 1345 CpG island CpG island 21219
Tssr83269 8 122443363 to 122443403 40 - TSS region transcription start site region 83269
Tssr83270 8 122443404 to 122443426 22 - TSS region transcription start site region 83270
Tssr83271 8 122443432 to 122443439 7 - TSS region transcription start site region 83271
Tssr79868 8 122443635 to 122443659 24 + TSS region transcription start site region 79868
9330133O14Rik 8 122443656 to 122446476 2820 + lncRNA gene RIKEN cDNA 9330133O14 gene
Tssr79869 8 122443662 to 122443721 59 + TSS region transcription start site region 79869
Tssr79870 8 122444056 to 122444059 3 + TSS region transcription start site region 79870
Gm20735 8 122445268 to 122451322 6054 - lincRNA gene predicted gene, 20735
Snai3 8 122454208 to 122460733 6525 - protein coding gene snail family zinc finger 3
Cpgi21220 8 122460258 to 122461395 1137 CpG island CpG island 21220
Tssr83272 8 122460666 to 122460695 29 - TSS region transcription start site region 83272
Rnf166 8 122466147 to 122476064 9917 - protein coding gene ring finger protein 166
Tssr79871 8 122470196 to 122470212 16 + TSS region transcription start site region 79871
Tssr79872 8 122470227 to 122470232 5 + TSS region transcription start site region 79872
Gm24366 8 122471627 to 122471712 85 - miRNA gene predicted gene, 24366
Tssr83273 8 122474776 to 122474781 5 - TSS region transcription start site region 83273
Cpgi21221 8 122474984 to 122476687 1703 CpG island CpG island 21221
Tssr83274 8 122475709 to 122475729 20 - TSS region transcription start site region 83274
Tssr83275 8 122476003 to 122476026 23 - TSS region transcription start site region 83275
Tssr83276 8 122476036 to 122476088 52 - TSS region transcription start site region 83276
Ctu2 8 122476094 to 122483094 7000 + protein coding gene cytosolic thiouridylase subunit 2
Tssr83277 8 122476096 to 122476115 19 - TSS region transcription start site region 83277
Tssr79873 8 122476152 to 122476194 42 + TSS region transcription start site region 79873
Tssr79874 8 122476196 to 122476223 27 + TSS region transcription start site region 79874
Piezo1 8 122481698 to 122551329 69631 - protein coding gene piezo-type mechanosensitive ion channel component 1
Cpgi21222 8 122488117 to 122488511 394 CpG island CpG island 21222
Tssr83278 8 122491935 to 122491941 6 - TSS region transcription start site region 83278