Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:121805194-121905621

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Klhdc4 8 121796313 to 121829569 33256 - protein coding gene kelch domain containing 4
Tssr83242 8 121805309 to 121805320 11 - TSS region transcription start site region 83242
Tssr83243 8 121805326 to 121805338 12 - TSS region transcription start site region 83243
Tssr2715 8 121805498 to 121805511 13 + TSS region transcription start site region 2715
Tssr83244 8 121806262 to 121806284 22 - TSS region transcription start site region 83244
Tssr79826 8 121806386 to 121806397 11 + TSS region transcription start site region 79826
Gm20406 8 121806415 to 121807369 954 + antisense lncRNA gene predicted gene 20406
Tssr79827 8 121806418 to 121806432 14 + TSS region transcription start site region 79827
Cpgi21206 8 121829019 to 121829870 851 CpG island CpG island 21206
Tssr83245 8 121829506 to 121829515 9 - TSS region transcription start site region 83245
Tssr83246 8 121829520 to 121829571 51 - TSS region transcription start site region 83246
Tssr79828 8 121829670 to 121829689 19 + TSS region transcription start site region 79828
Gm24283 8 121830436 to 121830542 106 + snRNA gene predicted gene, 24283
Gm42047 8 121833800 to 121838825 5025 + pseudogene predicted gene, 42047
Gm42048 8 121843142 to 121843902 760 + lncRNA gene predicted gene, 42048
Gm26812 8 121850194 to 121860621 10427 + lincRNA gene predicted gene, 26812
Cpgi21207 8 121850893 to 121851088 195 CpG island CpG island 21207
Tssr83247 8 121851051 to 121851068 17 - TSS region transcription start site region 83247
Tssr79829 8 121851330 to 121851364 34 + TSS region transcription start site region 79829
9530085P06Rik 8 121856777 to 121857603 826 - unclassified gene RIKEN cDNA 9530085P06 gene
D8Ertd56e 8 121873548 to 121873748 200 DNA segment DNA segment, Chr 8, ERATO Doi 56, expressed
Slc7a5 8 121881146 to 121907686 26540 - protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 5
Tssr83248 8 121882958 to 121882984 26 - TSS region transcription start site region 83248
Tssr83249 8 121885959 to 121885987 28 - TSS region transcription start site region 83249