Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:121593635-121793840

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Map1lc3b 8 121590468 to 121598047 7579 + protein coding gene microtubule-associated protein 1 light chain 3 beta
Tssr79816 8 121597779 to 121597794 15 + TSS region transcription start site region 79816
Zcchc14 8 121598697 to 121652716 54019 - protein coding gene zinc finger, CCHC domain containing 14
Tssr83234 8 121602254 to 121602258 4 - TSS region transcription start site region 83234
2600002B07Rik 8 121616547 to 121617907 1360 unclassified gene RIKEN cDNA 2600002B07 gene
Cpgi21198 8 121648438 to 121648706 268 CpG island CpG island 21198
Cpgi21199 8 121651132 to 121653656 2524 CpG island CpG island 21199
Tssr83235 8 121652852 to 121652888 36 - TSS region transcription start site region 83235
Tssr83236 8 121652895 to 121652913 18 - TSS region transcription start site region 83236
Gm27030 8 121654054 to 121654517 463 + lincRNA gene predicted gene, 27030
Cpgi21200 8 121660799 to 121660995 196 CpG island CpG island 21200
Gm23299 8 121666628 to 121666706 78 - snoRNA gene predicted gene, 23299
Gm45833 8 121666814 to 121674088 7274 - lincRNA gene predicted gene 45833
Cpgi21201 8 121675755 to 121675965 210 CpG island CpG island 21201
Cpgi21202 8 121693635 to 121693840 205 CpG island CpG island 21202
Cpgi21203 8 121709256 to 121709488 232 CpG island CpG island 21203
Gm46065 8 121725711 to 121730504 4793 - protein coding gene predicted gene, 46065
Cpgi21204 8 121729274 to 121731887 2613 CpG island CpG island 21204
Tssr79817 8 121729962 to 121729999 37 + TSS region transcription start site region 79817
Tssr2711 8 121730009 to 121730019 10 + TSS region transcription start site region 2711
Tssr79818 8 121730079 to 121730164 85 + TSS region transcription start site region 79818
Tssr79819 8 121730333 to 121730358 25 + TSS region transcription start site region 79819
Tssr79820 8 121730372 to 121730387 15 + TSS region transcription start site region 79820
Tssr79821 8 121730391 to 121730404 13 + TSS region transcription start site region 79821
Jph3 8 121730559 to 121791083 60524 + protein coding gene junctophilin 3
Tssr79822 8 121730587 to 121730589 2 + TSS region transcription start site region 79822
Cpgi21205 8 121752886 to 121753900 1014 CpG island CpG island 21205
Tssr83237 8 121792184 to 121792189 5 - TSS region transcription start site region 83237
Tssr83238 8 121792200 to 121792210 10 - TSS region transcription start site region 83238
Tssr83239 8 121792214 to 121792232 18 - TSS region transcription start site region 83239
Tssr83240 8 121792262 to 121792273 11 - TSS region transcription start site region 83240
Tssr79823 8 121792331 to 121792339 8 + TSS region transcription start site region 79823
Tssr83241 8 121792335 to 121792349 14 - TSS region transcription start site region 83241
Tssr79824 8 121792449 to 121792472 23 + TSS region transcription start site region 79824
Tssr79825 8 121792478 to 121792488 10 + TSS region transcription start site region 79825