Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:121112549-121433335

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi21177 8 121113307 to 121113690 383 CpG island CpG island 21177
Cpgi21178 8 121114803 to 121115501 698 CpG island CpG island 21178
Cpgi21179 8 121116031 to 121118330 2299 CpG island CpG island 21179
Tssr79801 8 121116163 to 121116177 14 + TSS region transcription start site region 79801
Foxc2 8 121116171 to 121118895 2724 + protein coding gene forkhead box C2
Tssr79802 8 121116190 to 121116201 11 + TSS region transcription start site region 79802
Tssr79803 8 121116866 to 121116872 6 + TSS region transcription start site region 79803
Tssr79804 8 121118325 to 121118332 7 + TSS region transcription start site region 79804
Cpgi21180 8 121125286 to 121125901 615 CpG island CpG island 21180
Tssr83223 8 121125635 to 121125640 5 - TSS region transcription start site region 83223
Cpgi21181 8 121127732 to 121129407 1675 CpG island CpG island 21181
Tssr79805 8 121127827 to 121127848 21 + TSS region transcription start site region 79805
Foxl1 8 121127940 to 121130644 2704 + protein coding gene forkhead box L1
Gm37609 8 121140943 to 121141620 677 + unclassified gene predicted gene, 37609
Gm33633 8 121166916 to 121168363 1447 - lncRNA gene predicted gene, 33633
Cpgi21182 8 121170681 to 121170875 194 CpG island CpG island 21182
Gm42046 8 121172324 to 121183403 11079 + lncRNA gene predicted gene, 42046
5033426O07Rik 8 121198714 to 121203496 4782 - lincRNA gene RIKEN cDNA 5033426O07 gene
Cpgi21183 8 121213174 to 121213564 390 CpG island CpG island 21183
Gm33739 8 121213807 to 121222717 8910 + lncRNA gene predicted gene, 33739
Cpgi21184 8 121220574 to 121220785 211 CpG island CpG island 21184
D8Mit169 8 121232856 to 121232998 142 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 169
Gm26815 8 121256747 to 121356836 100089 - lincRNA gene predicted gene, 26815
Gm33823 8 121261747 to 121264665 2918 - lncRNA gene predicted gene, 33823
Cpgi21185 8 121272549 to 121273335 786 CpG island CpG island 21185
Cpgi21186 8 121290701 to 121290859 158 CpG island CpG island 21186
Cpgi21187 8 121293916 to 121294534 618 CpG island CpG island 21187
D8Mit36 8 121307238 to 121307371 133 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 36
Sluc38 8 121307238 to 121307371 133 QTL susceptibility to lung cancer 38
Sluc38a 8 121307238 to 121307371 133 QTL susceptibility to lung cancer 38a
Cpgi21188 8 121311004 to 121311209 205 CpG island CpG island 21188
Tssr79806 8 121421208 to 121421218 10 + TSS region transcription start site region 79806
Gm26747 8 121421238 to 121428043 6805 + lincRNA gene predicted gene, 26747