Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:120669399-121091217

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cox4i1 8 120668225 to 120674209 5984 + protein coding gene cytochrome c oxidase subunit 4I1
Tssr79785 8 120672732 to 120672762 30 + TSS region transcription start site region 79785
Tssr79786 8 120685380 to 120685410 30 + TSS region transcription start site region 79786
Gm33142 8 120685399 to 120686265 866 + unclassified non-coding RNA gene predicted gene, 33142
Tssr79787 8 120685843 to 120685870 27 + TSS region transcription start site region 79787
Gm39265 8 120686054 to 120701181 15127 - lncRNA gene predicted gene, 39265
Tssr79788 8 120697716 to 120697721 5 + TSS region transcription start site region 79788
Tssr83213 8 120716085 to 120716100 15 - TSS region transcription start site region 83213
Gm24239 8 120717500 to 120717754 254 - unclassified non-coding RNA gene predicted gene, 24239
Gm18709 8 120727263 to 120727943 680 + pseudogene predicted gene, 18709
Cpgi21161 8 120735652 to 120736708 1056 CpG island CpG island 21161
Tssr79789 8 120736352 to 120736364 12 + TSS region transcription start site region 79789
Irf8 8 120736358 to 120756694 20336 + protein coding gene interferon regulatory factor 8
Tssr79790 8 120736490 to 120736501 11 + TSS region transcription start site region 79790
Tssr79791 8 120739660 to 120739675 15 + TSS region transcription start site region 79791
Tssr79792 8 120739833 to 120739857 24 + TSS region transcription start site region 79792
Tssr79793 8 120744804 to 120744810 6 + TSS region transcription start site region 79793
Tssr79794 8 120756305 to 120756346 41 + TSS region transcription start site region 79794
Gm39266 8 120767475 to 120770229 2754 - lncRNA gene predicted gene, 39266
D8Mit55 8 120785201 to 120785344 143 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 55
Gm33199 8 120786929 to 120795374 8445 + lncRNA gene predicted gene, 33199
Tssr79795 8 120832952 to 120832954 2 + TSS region transcription start site region 79795
Cpgi21162 8 120847871 to 120848052 181 CpG island CpG island 21162
Gm39267 8 120851385 to 120867621 16236 - lncRNA gene predicted gene, 39267
Gm33368 8 120868990 to 120874597 5607 - lncRNA gene predicted gene, 33368
Gm26878 8 120879399 to 120881217 1818 + lincRNA gene predicted gene, 26878
Cpgi21163 8 120883341 to 120883674 333 CpG island CpG island 21163
Cpgi21164 8 120887422 to 120887685 263 CpG island CpG island 21164
Cpgi21165 8 120900481 to 120900867 386 CpG island CpG island 21165
Gm33471 8 120917008 to 120919697 2689 + lncRNA gene predicted gene, 33471
Cpgi21166 8 120971997 to 120972561 564 CpG island CpG island 21166
Gm28324 8 121002927 to 121003190 263 + lincRNA gene predicted gene 28324
Gm33579 8 121016513 to 121023617 7104 - lncRNA gene predicted gene, 33579
Cpgi21167 8 121016632 to 121016989 357 CpG island CpG island 21167
Gm46071 8 121035751 to 121037957 2206 - lncRNA gene predicted gene, 46071
Cpgi21168 8 121043372 to 121043729 357 CpG island CpG island 21168
Fendrr 8 121054882 to 121083110 28228 - lncRNA gene Foxf1 adjacent non-coding developmental regulatory RNA
Cpgi21169 8 121063716 to 121063887 171 CpG island CpG island 21169
Tssr83214 8 121070300 to 121070323 23 - TSS region transcription start site region 83214
Cpgi21170 8 121071529 to 121071694 165 CpG island CpG island 21170
Cpgi21171 8 121073480 to 121074034 554 CpG island CpG island 21171
Tssr79796 8 121079479 to 121079485 6 + TSS region transcription start site region 79796
Cpgi21172 8 121080209 to 121081235 1026 CpG island CpG island 21172
Cpgi21173 8 121082307 to 121085419 3112 CpG island CpG island 21173
Tssr83215 8 121083023 to 121083050 27 - TSS region transcription start site region 83215
Tssr83216 8 121083052 to 121083083 31 - TSS region transcription start site region 83216
Tssr83217 8 121083085 to 121083153 68 - TSS region transcription start site region 83217
Tssr83218 8 121083166 to 121083191 25 - TSS region transcription start site region 83218
Tssr79797 8 121083330 to 121083340 10 + TSS region transcription start site region 79797
Tssr79798 8 121083838 to 121083859 21 + TSS region transcription start site region 79798
Tssr83219 8 121083916 to 121083934 18 - TSS region transcription start site region 83219
Tssr83220 8 121083949 to 121083972 23 - TSS region transcription start site region 83220
Tssr79799 8 121084334 to 121084341 7 + TSS region transcription start site region 79799
Tssr79800 8 121084352 to 121084368 16 + TSS region transcription start site region 79800
Foxf1 8 121084386 to 121088144 3758 + protein coding gene forkhead box F1
Gm27530 8 121084609 to 121084706 97 - miRNA gene predicted gene, 27530
Cpgi21174 8 121088722 to 121090030 1308 CpG island CpG island 21174