Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:120164334-120454634

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
6430548M08Rik 8 120114152 to 120165306 51154 + protein coding gene RIKEN cDNA 6430548M08 gene
Fam92b 8 120166397 to 120177466 11069 - protein coding gene family with sequence similarity 92, member B
Tssr83182 8 120177420 to 120177435 15 - TSS region transcription start site region 83182
Tssr83183 8 120177440 to 120177478 38 - TSS region transcription start site region 83183
Cpgi21135 8 120191176 to 120191445 269 CpG island CpG island 21135
A330074K22Rik 8 120204434 to 120228230 23796 - lincRNA gene RIKEN cDNA A330074K22 gene
Cpgi21136 8 120227839 to 120230422 2583 CpG island CpG island 21136
Tssr83184 8 120228075 to 120228095 20 - TSS region transcription start site region 83184
Tssr83185 8 120228104 to 120228145 41 - TSS region transcription start site region 83185
Tssr83186 8 120228221 to 120228297 76 - TSS region transcription start site region 83186
Tssr83187 8 120228301 to 120228351 50 - TSS region transcription start site region 83187
Tssr79744 8 120228462 to 120228475 13 + TSS region transcription start site region 79744
Tssr79745 8 120228488 to 120228503 15 + TSS region transcription start site region 79745
Gse1 8 120228827 to 120581383 352556 + protein coding gene genetic suppressor element 1, coiled-coil protein
Cpgi21137 8 120264784 to 120265053 269 CpG island CpG island 21137
Tssr79746 8 120265799 to 120265830 31 + TSS region transcription start site region 79746
Cpgi21138 8 120275941 to 120276139 198 CpG island CpG island 21138
Cpgi21139 8 120276405 to 120277096 691 CpG island CpG island 21139
Tssr79747 8 120276725 to 120276734 9 + TSS region transcription start site region 79747
Tssr83188 8 120293608 to 120293622 14 - TSS region transcription start site region 83188
Cpgi21140 8 120307156 to 120307382 226 CpG island CpG island 21140
Cpgi21141 8 120309334 to 120309634 300 CpG island CpG island 21141
Gm32968 8 120327675 to 120339024 11349 + lncRNA gene predicted gene, 32968
Tssr83189 8 120332893 to 120332912 19 - TSS region transcription start site region 83189
Tssr83190 8 120333014 to 120333037 23 - TSS region transcription start site region 83190
Tssr79748 8 120335182 to 120335226 44 + TSS region transcription start site region 79748
Gm39264 8 120342211 to 120345258 3047 - lncRNA gene predicted gene, 39264
Tssr79749 8 120343855 to 120343893 38 + TSS region transcription start site region 79749
Tssr79750 8 120369154 to 120369176 22 + TSS region transcription start site region 79750
Tssr79751 8 120372317 to 120372329 12 + TSS region transcription start site region 79751
Cpgi21142 8 120393984 to 120394181 197 CpG island CpG island 21142
Cpgi21143 8 120399437 to 120399794 357 CpG island CpG island 21143
Tssr83191 8 120419947 to 120419953 6 - TSS region transcription start site region 83191
Tssr83192 8 120428282 to 120428287 5 - TSS region transcription start site region 83192
Gm22715 8 120443459 to 120443549 90 - miRNA gene predicted gene, 22715