Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:119737262-123847273

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923 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp2c2 8 119700009 to 119757717 57708 + protein coding gene ATPase, Ca++ transporting, type 2C, member 2
Tssr79713 8 119754209 to 119754240 31 + TSS region transcription start site region 79713
Tssr79714 8 119754242 to 119754266 24 + TSS region transcription start site region 79714
Cpgi21123 8 119755472 to 119755750 278 CpG island CpG island 21123
Meak7 8 119760587 to 119778416 17829 - protein coding gene MTOR associated protein , eak-7 homolog
Cpgi21124 8 119778327 to 119778619 292 CpG island CpG island 21124
Tssr83156 8 119778380 to 119778431 51 - TSS region transcription start site region 83156
Tssr79715 8 119809214 to 119809227 13 + TSS region transcription start site region 79715
Cotl1 8 119809222 to 119840544 31322 - protein coding gene coactosin-like 1 (Dictyostelium)
Tssr83157 8 119809953 to 119809968 15 - TSS region transcription start site region 83157
Tssr83158 8 119810033 to 119810079 46 - TSS region transcription start site region 83158
Tssr79716 8 119810045 to 119810073 28 + TSS region transcription start site region 79716
Tssr83159 8 119810088 to 119810136 48 - TSS region transcription start site region 83159
Tssr83160 8 119810185 to 119810203 18 - TSS region transcription start site region 83160
Tssr83161 8 119810216 to 119810227 11 - TSS region transcription start site region 83161
Tssr83162 8 119810263 to 119810281 18 - TSS region transcription start site region 83162
Tssr83163 8 119810330 to 119810347 17 - TSS region transcription start site region 83163
Tssr79717 8 119811339 to 119811344 5 + TSS region transcription start site region 79717
Tssr83164 8 119822703 to 119822724 21 - TSS region transcription start site region 83164
Tssr83165 8 119822735 to 119822752 17 - TSS region transcription start site region 83165
Tssr83166 8 119828238 to 119828276 38 - TSS region transcription start site region 83166
Tssr79718 8 119828859 to 119828892 33 + TSS region transcription start site region 79718
Tssr79719 8 119829652 to 119829659 7 + TSS region transcription start site region 79719
Tssr83167 8 119830613 to 119830624 11 - TSS region transcription start site region 83167
Tssr79720 8 119830772 to 119830784 12 + TSS region transcription start site region 79720
Tssr83168 8 119833512 to 119833538 26 - TSS region transcription start site region 83168
Tssr83169 8 119834222 to 119834252 30 - TSS region transcription start site region 83169
Tssr83170 8 119834413 to 119834425 12 - TSS region transcription start site region 83170
Tssr83171 8 119836681 to 119836704 23 - TSS region transcription start site region 83171
Cpgi21125 8 119839943 to 119840945 1002 CpG island CpG island 21125
Tssr83172 8 119840185 to 119840223 38 - TSS region transcription start site region 83172
Tssr83173 8 119840531 to 119840549 18 - TSS region transcription start site region 83173
Tssr83174 8 119840567 to 119840570 3 - TSS region transcription start site region 83174
Tssr83175 8 119840580 to 119840584 4 - TSS region transcription start site region 83175
Tssr79721 8 119840725 to 119840749 24 + TSS region transcription start site region 79721
D8Mit354.2 8 119843552 to 119843674 122 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 354.2
Cpgi21126 8 119861900 to 119862764 864 CpG island CpG island 21126
Tssr79722 8 119862239 to 119862294 55 + TSS region transcription start site region 79722
Klhl36 8 119862266 to 119876995 14729 + protein coding gene kelch-like 36
Cpgi21127 8 119869461 to 119870640 1179 CpG island CpG island 21127
Usp10 8 119910360 to 119957560 47200 + protein coding gene ubiquitin specific peptidase 10
Cpgi21128 8 119910378 to 119911605 1227 CpG island CpG island 21128
Tssr79723 8 119910792 to 119910848 56 + TSS region transcription start site region 79723
Gm20388 8 119910841 to 124345722 4434881 + protein coding gene predicted gene 20388
Tssr79724 8 119918313 to 119918337 24 + TSS region transcription start site region 79724
Cpgi21129 8 119941555 to 119941930 375 CpG island CpG island 21129
Tssr79725 8 119942024 to 119942057 33 + TSS region transcription start site region 79725
Tssr79726 8 119947705 to 119947729 24 + TSS region transcription start site region 79726
Tssr2705 8 119975193 to 119975196 3 + TSS region transcription start site region 2705
Cpgi21130 8 119992069 to 119993072 1003 CpG island CpG island 21130
Crispld2 8 119992438 to 120052793 60355 + protein coding gene cysteine-rich secretory protein LCCL domain containing 2
Tssr79727 8 119992500 to 119992526 26 + TSS region transcription start site region 79727
Tssr79728 8 120002699 to 120002710 11 + TSS region transcription start site region 79728
Tssr79729 8 120002720 to 120002741 21 + TSS region transcription start site region 79729
Gm15684 8 120036194 to 120045287 9093 - antisense lncRNA gene predicted gene 15684
Tssr2706 8 120041443 to 120041459 16 + TSS region transcription start site region 2706
Tssr83176 8 120042761 to 120042768 7 - TSS region transcription start site region 83176
Tssr79730 8 120042936 to 120042944 8 + TSS region transcription start site region 79730
Tssr79731 8 120042962 to 120042972 10 + TSS region transcription start site region 79731
Tssr79732 8 120050227 to 120050262 35 + TSS region transcription start site region 79732
Cpgi21131 8 120062901 to 120063136 235 CpG island CpG island 21131
Zdhhc7 8 120081095 to 120101472 20377 - protein coding gene zinc finger, DHHC domain containing 7
Gm15898 8 120095060 to 120097736 2676 + antisense lncRNA gene predicted gene 15898
Cpgi21132 8 120100717 to 120102071 1354 CpG island CpG island 21132
Tssr83177 8 120101286 to 120101336 50 - TSS region transcription start site region 83177
Tssr79733 8 120101354 to 120101395 41 + TSS region transcription start site region 79733
Tssr79734 8 120101398 to 120101431 33 + TSS region transcription start site region 79734
Tssr79735 8 120101433 to 120101455 22 + TSS region transcription start site region 79735
Tssr83178 8 120101473 to 120101506 33 - TSS region transcription start site region 83178
Tssr79736 8 120101550 to 120101592 42 + TSS region transcription start site region 79736
A130014A01Rik 8 120101582 to 120103904 2322 + bidirectional promoter lncRNA gene RIKEN cDNA A130014A01 gene
Tssr79737 8 120109421 to 120109451 30 + TSS region transcription start site region 79737
Gm38379 8 120109441 to 120110965 1524 + unclassified gene predicted gene, 38379
Tssr79738 8 120112874 to 120112900 26 + TSS region transcription start site region 79738
Tssr2707 8 120112934 to 120112937 3 + TSS region transcription start site region 2707
Cpgi21133 8 120113384 to 120114983 1599 CpG island CpG island 21133
Tssr2708 8 120113863 to 120113893 30 - TSS region transcription start site region 2708
Tssr83179 8 120113896 to 120113906 10 - TSS region transcription start site region 83179
Tssr79739 8 120114127 to 120114135 8 + TSS region transcription start site region 79739
Tssr79740 8 120114144 to 120114176 32 + TSS region transcription start site region 79740
6430548M08Rik 8 120114152 to 120165306 51154 + protein coding gene RIKEN cDNA 6430548M08 gene
Tssr2709 8 120116090 to 120116103 13 - TSS region transcription start site region 2709
Tssr83180 8 120116111 to 120116128 17 - TSS region transcription start site region 83180
Tssr83181 8 120116144 to 120116158 14 - TSS region transcription start site region 83181
Tssr79741 8 120120144 to 120120150 6 + TSS region transcription start site region 79741
D8Mit201 8 120140019 to 120140162 143 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 201
Tssr79742 8 120145247 to 120145263 16 + TSS region transcription start site region 79742
Tssr79743 8 120145376 to 120145421 45 + TSS region transcription start site region 79743
Cpgi21134 8 120160811 to 120161064 253 CpG island CpG island 21134
Fam92b 8 120166397 to 120177466 11069 - protein coding gene family with sequence similarity 92, member B
Tssr83182 8 120177420 to 120177435 15 - TSS region transcription start site region 83182
Tssr83183 8 120177440 to 120177478 38 - TSS region transcription start site region 83183
Cpgi21135 8 120191176 to 120191445 269 CpG island CpG island 21135
A330074K22Rik 8 120204434 to 120228230 23796 - lincRNA gene RIKEN cDNA A330074K22 gene
Cpgi21136 8 120227839 to 120230422 2583 CpG island CpG island 21136
Tssr83184 8 120228075 to 120228095 20 - TSS region transcription start site region 83184
Tssr83185 8 120228104 to 120228145 41 - TSS region transcription start site region 83185
Tssr83186 8 120228221 to 120228297 76 - TSS region transcription start site region 83186
Tssr83187 8 120228301 to 120228351 50 - TSS region transcription start site region 83187
Tssr79744 8 120228462 to 120228475 13 + TSS region transcription start site region 79744
Tssr79745 8 120228488 to 120228503 15 + TSS region transcription start site region 79745
Gse1 8 120228827 to 120581383 352556 + protein coding gene genetic suppressor element 1, coiled-coil protein
Cpgi21137 8 120264784 to 120265053 269 CpG island CpG island 21137
Tssr79746 8 120265799 to 120265830 31 + TSS region transcription start site region 79746
Cpgi21138 8 120275941 to 120276139 198 CpG island CpG island 21138
Cpgi21139 8 120276405 to 120277096 691 CpG island CpG island 21139
Tssr79747 8 120276725 to 120276734 9 + TSS region transcription start site region 79747
Tssr83188 8 120293608 to 120293622 14 - TSS region transcription start site region 83188
Cpgi21140 8 120307156 to 120307382 226 CpG island CpG island 21140
Cpgi21141 8 120309334 to 120309634 300 CpG island CpG island 21141
Gm32968 8 120327675 to 120339024 11349 + lncRNA gene predicted gene, 32968
Tssr83189 8 120332893 to 120332912 19 - TSS region transcription start site region 83189
Tssr83190 8 120333014 to 120333037 23 - TSS region transcription start site region 83190
Tssr79748 8 120335182 to 120335226 44 + TSS region transcription start site region 79748
Gm39264 8 120342211 to 120345258 3047 - lncRNA gene predicted gene, 39264
Tssr79749 8 120343855 to 120343893 38 + TSS region transcription start site region 79749
Tssr79750 8 120369154 to 120369176 22 + TSS region transcription start site region 79750
Tssr79751 8 120372317 to 120372329 12 + TSS region transcription start site region 79751
Cpgi21142 8 120393984 to 120394181 197 CpG island CpG island 21142
Cpgi21143 8 120399437 to 120399794 357 CpG island CpG island 21143
Tssr83191 8 120419947 to 120419953 6 - TSS region transcription start site region 83191
Tssr83192 8 120428282 to 120428287 5 - TSS region transcription start site region 83192
Gm22715 8 120443459 to 120443549 90 - miRNA gene predicted gene, 22715
Tssr79752 8 120464486 to 120464490 4 + TSS region transcription start site region 79752
Cpgi21144 8 120486474 to 120488401 1927 CpG island CpG island 21144
Tssr79753 8 120487148 to 120487165 17 + TSS region transcription start site region 79753
Tssr79754 8 120487614 to 120487649 35 + TSS region transcription start site region 79754
Tssr79755 8 120487652 to 120487666 14 + TSS region transcription start site region 79755
Tssr79756 8 120488179 to 120488200 21 + TSS region transcription start site region 79756
Tssr79757 8 120488206 to 120488225 19 + TSS region transcription start site region 79757
Tssr79758 8 120488232 to 120488241 9 + TSS region transcription start site region 79758
Tssr79759 8 120488416 to 120488490 74 + TSS region transcription start site region 79759
Tssr79760 8 120488491 to 120488510 19 + TSS region transcription start site region 79760
Tssr79761 8 120488542 to 120488569 27 + TSS region transcription start site region 79761
Tssr79762 8 120488730 to 120488748 18 + TSS region transcription start site region 79762
Tssr79763 8 120488752 to 120488803 51 + TSS region transcription start site region 79763
Cpgi21145 8 120488764 to 120490193 1429 CpG island CpG island 21145
Tssr79764 8 120488821 to 120488840 19 + TSS region transcription start site region 79764
Tssr79765 8 120489053 to 120489067 14 + TSS region transcription start site region 79765
Tssr83193 8 120489332 to 120489344 12 - TSS region transcription start site region 83193
Tssr83194 8 120489428 to 120489453 25 - TSS region transcription start site region 83194
Cpgi21146 8 120494825 to 120495111 286 CpG island CpG island 21146
Cpgi21147 8 120496559 to 120496823 264 CpG island CpG island 21147
Cpgi21148 8 120505236 to 120505409 173 CpG island CpG island 21148
Tssr79766 8 120506012 to 120506023 11 + TSS region transcription start site region 79766
Gm26971 8 120520615 to 120521686 1071 + sense intronic lncRNA gene predicted gene, 26971
Tssr79767 8 120522463 to 120522489 26 + TSS region transcription start site region 79767
Tssr79768 8 120525351 to 120525371 20 + TSS region transcription start site region 79768
Tssr83195 8 120532597 to 120532638 41 - TSS region transcription start site region 83195
Cpgi21149 8 120532863 to 120533082 219 CpG island CpG island 21149
Cpgi21150 8 120535010 to 120539245 4235 CpG island CpG island 21150
Tssr79769 8 120535723 to 120535734 11 + TSS region transcription start site region 79769
Tssr79770 8 120535789 to 120535867 78 + TSS region transcription start site region 79770
Tssr79771 8 120536559 to 120536573 14 + TSS region transcription start site region 79771
1700016A09Rik 8 120536892 to 120537726 834 - unclassified gene RIKEN cDNA 1700016A09 gene
Tssr83196 8 120537264 to 120537276 12 - TSS region transcription start site region 83196
Tssr79772 8 120537363 to 120537393 30 + TSS region transcription start site region 79772
Tssr79773 8 120537423 to 120537445 22 + TSS region transcription start site region 79773
Tssr79774 8 120537447 to 120537471 24 + TSS region transcription start site region 79774
Tssr79775 8 120537472 to 120537501 29 + TSS region transcription start site region 79775
Tssr79776 8 120537505 to 120537512 7 + TSS region transcription start site region 79776
Tssr83197 8 120537572 to 120537579 7 - TSS region transcription start site region 83197
Tssr83198 8 120537642 to 120537658 16 - TSS region transcription start site region 83198
Tssr83199 8 120537664 to 120537692 28 - TSS region transcription start site region 83199
Tssr83200 8 120537766 to 120537782 16 - TSS region transcription start site region 83200
Tssr83201 8 120538647 to 120538666 19 - TSS region transcription start site region 83201
Mir7687 8 120538696 to 120538754 58 + miRNA gene microRNA 7687
Cpgi21151 8 120548439 to 120548686 247 CpG island CpG island 21151
Tssr79777 8 120549290 to 120549292 2 + TSS region transcription start site region 79777
Cpgi21152 8 120549467 to 120549790 323 CpG island CpG island 21152
Cpgi21153 8 120554739 to 120554932 193 CpG island CpG island 21153
Cpgi21154 8 120572592 to 120572900 308 CpG island CpG island 21154
Cpgi21155 8 120577886 to 120578085 199 CpG island CpG island 21155
Gins2 8 120581266 to 120589075 7809 - protein coding gene GINS complex subunit 2 (Psf2 homolog)
Cpgi21156 8 120588661 to 120589673 1012 CpG island CpG island 21156
Tssr83202 8 120589019 to 120589050 31 - TSS region transcription start site region 83202
Tssr83203 8 120589059 to 120589068 9 - TSS region transcription start site region 83203
Tssr83204 8 120589071 to 120589080 9 - TSS region transcription start site region 83204
Tssr83205 8 120589081 to 120589090 9 - TSS region transcription start site region 83205
Gm10614 8 120589531 to 120593801 4270 + bidirectional promoter lncRNA gene predicted gene 10614
Gm45834 8 120597110 to 120597563 453 - pseudogene predicted gene 45834
Cpgi21157 8 120598463 to 120598915 452 CpG island CpG island 21157
Gm26739 8 120598552 to 120599277 725 + lincRNA gene predicted gene, 26739
1190005I06Rik 8 120608602 to 120634382 25780 - protein coding gene RIKEN cDNA 1190005I06 gene
Cpgi21158 8 120608628 to 120608971 343 CpG island CpG island 21158
Gm27021 8 120608786 to 120668079 59293 - protein coding gene predicted gene, 27021
Tssr79778 8 120627469 to 120627475 6 + TSS region transcription start site region 79778
Gm33075 8 120628524 to 120632471 3947 + lncRNA gene predicted gene, 33075
Tssr83206 8 120628570 to 120628577 7 - TSS region transcription start site region 83206
Tssr83207 8 120628612 to 120628621 9 - TSS region transcription start site region 83207
Tssr79779 8 120628698 to 120628711 13 + TSS region transcription start site region 79779
Tssr79780 8 120628723 to 120628728 5 + TSS region transcription start site region 79780
Cpgi21159 8 120633561 to 120634810 1249 CpG island CpG island 21159
Tssr83208 8 120634358 to 120634374 16 - TSS region transcription start site region 83208
Tssr83209 8 120634379 to 120634398 19 - TSS region transcription start site region 83209
Gm26537 8 120643950 to 120653687 9737 + antisense lncRNA gene predicted gene, 26537
Emc8 8 120653914 to 120668112 14198 - protein coding gene ER membrane protein complex subunit 8
Cpgi21160 8 120667535 to 120669052 1517 CpG island CpG island 21160
Tssr83210 8 120668030 to 120668056 26 - TSS region transcription start site region 83210
Tssr83211 8 120668058 to 120668098 40 - TSS region transcription start site region 83211