Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:119670378-120151605

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95 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm32352 8 119659475 to 119670881 11406 - antisense lncRNA gene predicted gene, 32352
Wfdc1 8 119666365 to 119688020 21655 + protein coding gene WAP four-disulfide core domain 1
Tssr83155 8 119693779 to 119693795 16 - TSS region transcription start site region 83155
Cpgi21122 8 119699888 to 119700168 280 CpG island CpG island 21122
Atp2c2 8 119700009 to 119757717 57708 + protein coding gene ATPase, Ca++ transporting, type 2C, member 2
Tssr79712 8 119700017 to 119700062 45 + TSS region transcription start site region 79712
5033405D04Rik 8 119714453 to 119715451 998 unclassified gene RIKEN cDNA 5033405D04 gene
Gm45747 8 119714454 to 119715452 998 + unclassified gene predicted gene 45747
Tssr79713 8 119754209 to 119754240 31 + TSS region transcription start site region 79713
Tssr79714 8 119754242 to 119754266 24 + TSS region transcription start site region 79714
Cpgi21123 8 119755472 to 119755750 278 CpG island CpG island 21123
Meak7 8 119760587 to 119778416 17829 - protein coding gene MTOR associated protein , eak-7 homolog
Cpgi21124 8 119778327 to 119778619 292 CpG island CpG island 21124
Tssr83156 8 119778380 to 119778431 51 - TSS region transcription start site region 83156
Tssr79715 8 119809214 to 119809227 13 + TSS region transcription start site region 79715
Cotl1 8 119809222 to 119840544 31322 - protein coding gene coactosin-like 1 (Dictyostelium)
Tssr83157 8 119809953 to 119809968 15 - TSS region transcription start site region 83157
Tssr83158 8 119810033 to 119810079 46 - TSS region transcription start site region 83158
Tssr79716 8 119810045 to 119810073 28 + TSS region transcription start site region 79716
Tssr83159 8 119810088 to 119810136 48 - TSS region transcription start site region 83159
Tssr83160 8 119810185 to 119810203 18 - TSS region transcription start site region 83160
Tssr83161 8 119810216 to 119810227 11 - TSS region transcription start site region 83161
Tssr83162 8 119810263 to 119810281 18 - TSS region transcription start site region 83162
Tssr83163 8 119810330 to 119810347 17 - TSS region transcription start site region 83163
Tssr79717 8 119811339 to 119811344 5 + TSS region transcription start site region 79717
Tssr83164 8 119822703 to 119822724 21 - TSS region transcription start site region 83164
Tssr83165 8 119822735 to 119822752 17 - TSS region transcription start site region 83165
Tssr83166 8 119828238 to 119828276 38 - TSS region transcription start site region 83166
Tssr79718 8 119828859 to 119828892 33 + TSS region transcription start site region 79718
Tssr79719 8 119829652 to 119829659 7 + TSS region transcription start site region 79719
Tssr83167 8 119830613 to 119830624 11 - TSS region transcription start site region 83167
Tssr79720 8 119830772 to 119830784 12 + TSS region transcription start site region 79720
Tssr83168 8 119833512 to 119833538 26 - TSS region transcription start site region 83168
Tssr83169 8 119834222 to 119834252 30 - TSS region transcription start site region 83169
Tssr83170 8 119834413 to 119834425 12 - TSS region transcription start site region 83170
Tssr83171 8 119836681 to 119836704 23 - TSS region transcription start site region 83171
Cpgi21125 8 119839943 to 119840945 1002 CpG island CpG island 21125
Tssr83172 8 119840185 to 119840223 38 - TSS region transcription start site region 83172
Tssr83173 8 119840531 to 119840549 18 - TSS region transcription start site region 83173
Tssr83174 8 119840567 to 119840570 3 - TSS region transcription start site region 83174
Tssr83175 8 119840580 to 119840584 4 - TSS region transcription start site region 83175
Tssr79721 8 119840725 to 119840749 24 + TSS region transcription start site region 79721
D8Mit354.2 8 119843552 to 119843674 122 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 354.2
Cpgi21126 8 119861900 to 119862764 864 CpG island CpG island 21126
Tssr79722 8 119862239 to 119862294 55 + TSS region transcription start site region 79722
Klhl36 8 119862266 to 119876995 14729 + protein coding gene kelch-like 36
Cpgi21127 8 119869461 to 119870640 1179 CpG island CpG island 21127
Usp10 8 119910360 to 119957560 47200 + protein coding gene ubiquitin specific peptidase 10
Cpgi21128 8 119910378 to 119911605 1227 CpG island CpG island 21128
Tssr79723 8 119910792 to 119910848 56 + TSS region transcription start site region 79723
Gm20388 8 119910841 to 124345722 4434881 + protein coding gene predicted gene 20388
Tssr79724 8 119918313 to 119918337 24 + TSS region transcription start site region 79724
Cpgi21129 8 119941555 to 119941930 375 CpG island CpG island 21129
Tssr79725 8 119942024 to 119942057 33 + TSS region transcription start site region 79725
Tssr79726 8 119947705 to 119947729 24 + TSS region transcription start site region 79726
Tssr2705 8 119975193 to 119975196 3 + TSS region transcription start site region 2705
Cpgi21130 8 119992069 to 119993072 1003 CpG island CpG island 21130
Crispld2 8 119992438 to 120052793 60355 + protein coding gene cysteine-rich secretory protein LCCL domain containing 2
Tssr79727 8 119992500 to 119992526 26 + TSS region transcription start site region 79727
Tssr79728 8 120002699 to 120002710 11 + TSS region transcription start site region 79728
Tssr79729 8 120002720 to 120002741 21 + TSS region transcription start site region 79729
Gm15684 8 120036194 to 120045287 9093 - antisense lncRNA gene predicted gene 15684
Tssr2706 8 120041443 to 120041459 16 + TSS region transcription start site region 2706
Tssr83176 8 120042761 to 120042768 7 - TSS region transcription start site region 83176
Tssr79730 8 120042936 to 120042944 8 + TSS region transcription start site region 79730
Tssr79731 8 120042962 to 120042972 10 + TSS region transcription start site region 79731
Tssr79732 8 120050227 to 120050262 35 + TSS region transcription start site region 79732
Cpgi21131 8 120062901 to 120063136 235 CpG island CpG island 21131
Zdhhc7 8 120081095 to 120101472 20377 - protein coding gene zinc finger, DHHC domain containing 7
Gm15898 8 120095060 to 120097736 2676 + antisense lncRNA gene predicted gene 15898
Cpgi21132 8 120100717 to 120102071 1354 CpG island CpG island 21132
Tssr83177 8 120101286 to 120101336 50 - TSS region transcription start site region 83177
Tssr79733 8 120101354 to 120101395 41 + TSS region transcription start site region 79733
Tssr79734 8 120101398 to 120101431 33 + TSS region transcription start site region 79734
Tssr79735 8 120101433 to 120101455 22 + TSS region transcription start site region 79735
Tssr83178 8 120101473 to 120101506 33 - TSS region transcription start site region 83178
Tssr79736 8 120101550 to 120101592 42 + TSS region transcription start site region 79736
A130014A01Rik 8 120101582 to 120103904 2322 + bidirectional promoter lncRNA gene RIKEN cDNA A130014A01 gene
Tssr79737 8 120109421 to 120109451 30 + TSS region transcription start site region 79737
Gm38379 8 120109441 to 120110965 1524 + unclassified gene predicted gene, 38379
Tssr79738 8 120112874 to 120112900 26 + TSS region transcription start site region 79738
Tssr2707 8 120112934 to 120112937 3 + TSS region transcription start site region 2707
Cpgi21133 8 120113384 to 120114983 1599 CpG island CpG island 21133
Tssr2708 8 120113863 to 120113893 30 - TSS region transcription start site region 2708
Tssr83179 8 120113896 to 120113906 10 - TSS region transcription start site region 83179
Tssr79739 8 120114127 to 120114135 8 + TSS region transcription start site region 79739
Tssr79740 8 120114144 to 120114176 32 + TSS region transcription start site region 79740
6430548M08Rik 8 120114152 to 120165306 51154 + protein coding gene RIKEN cDNA 6430548M08 gene
Tssr2709 8 120116090 to 120116103 13 - TSS region transcription start site region 2709
Tssr83180 8 120116111 to 120116128 17 - TSS region transcription start site region 83180
Tssr83181 8 120116144 to 120116158 14 - TSS region transcription start site region 83181
Tssr79741 8 120120144 to 120120150 6 + TSS region transcription start site region 79741
D8Mit201 8 120140019 to 120140162 143 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 201
Tssr79742 8 120145247 to 120145263 16 + TSS region transcription start site region 79742
Tssr79743 8 120145376 to 120145421 45 + TSS region transcription start site region 79743