Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:118555389-119385393

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdh13 8 118283733 to 119324921 1041188 + protein coding gene cadherin 13
Tssr79661 8 118561437 to 118561440 3 + TSS region transcription start site region 79661
D8Mit361 8 118591011 to 118591117 106 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 361
Gm45721 8 118607127 to 118610499 3372 - antisense lncRNA gene predicted gene 45721
Gm45720 8 118610989 to 118615879 4890 - antisense lncRNA gene predicted gene 45720
Cpgi21110 8 118638842 to 118639114 272 CpG island CpG island 21110
D8Mit322 8 118719348 to 118719453 105 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 322
Gm22999 8 118726900 to 118726987 87 + snoRNA gene predicted gene, 22999
Tssr79662 8 118733384 to 118733388 4 + TSS region transcription start site region 79662
D8Mit275 8 118734610 to 118734807 197 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 275
Cpgi21111 8 118753918 to 118754074 156 CpG island CpG island 21111
Tssr79663 8 118799386 to 118799394 8 + TSS region transcription start site region 79663
Tssr79664 8 118891176 to 118891182 6 + TSS region transcription start site region 79664
D8Mit362 8 118899638 to 118899763 125 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 362
Tssr83115 8 118906604 to 118906606 2 - TSS region transcription start site region 83115
Tssr79665 8 118970389 to 118970393 4 + TSS region transcription start site region 79665
D8Mit168 8 118985838 to 118985973 135 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 168
Gm31893 8 119052306 to 119058195 5889 - lncRNA gene predicted gene, 31893
Tssr79666 8 119062044 to 119062058 14 + TSS region transcription start site region 79666
Tssr79667 8 119086561 to 119086562 1 + TSS region transcription start site region 79667
Tssr79668 8 119095002 to 119095032 30 + TSS region transcription start site region 79668
Tssr2700 8 119213901 to 119213907 6 + TSS region transcription start site region 2700
Tssr79669 8 119277368 to 119277392 24 + TSS region transcription start site region 79669
Tssr79670 8 119277396 to 119277428 32 + TSS region transcription start site region 79670
Tssr79671 8 119277429 to 119277440 11 + TSS region transcription start site region 79671
D8Mit187 8 119319605 to 119319885 280 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 187
Cpgi21112 8 119344133 to 119344969 836 CpG island CpG island 21112
Tssr79672 8 119344472 to 119344483 11 + TSS region transcription start site region 79672
Tssr79673 8 119344490 to 119344536 46 + TSS region transcription start site region 79673
Hsbp1 8 119344538 to 119348929 4391 + protein coding gene heat shock factor binding protein 1
Tssr79674 8 119344540 to 119344551 11 + TSS region transcription start site region 79674
Tssr79675 8 119344717 to 119344731 14 + TSS region transcription start site region 79675
Tssr79676 8 119344749 to 119344761 12 + TSS region transcription start site region 79676
Tssr79677 8 119344932 to 119344973 41 + TSS region transcription start site region 79677
Tssr79678 8 119345239 to 119345260 21 + TSS region transcription start site region 79678
Tssr79679 8 119345425 to 119345435 10 + TSS region transcription start site region 79679
Tssr79680 8 119345621 to 119345632 11 + TSS region transcription start site region 79680
Tssr79681 8 119348124 to 119348189 65 + TSS region transcription start site region 79681
D8Mit274 8 119359466 to 119359708 242 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 274
Gm45723 8 119384389 to 119386392 2003 + lincRNA gene predicted gene 45723