Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:117017972-117298035

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pkd1l2 8 116995679 to 117082449 86770 - protein coding gene polycystic kidney disease 1 like 2
Gm31519 8 117019043 to 117021941 2898 + lncRNA gene predicted gene, 31519
Cpgi21095 8 117028520 to 117028715 195 CpG island CpG island 21095
Gm15395 8 117036497 to 117043639 7142 + antisense lncRNA gene predicted gene 15395
Tssr79576 8 117051034 to 117051050 16 + TSS region transcription start site region 79576
Tssr79577 8 117055428 to 117055471 43 + TSS region transcription start site region 79577
Tssr83092 8 117068159 to 117068207 48 - TSS region transcription start site region 83092
Tssr2696 8 117074883 to 117074895 12 + TSS region transcription start site region 2696
Bco1 8 117095854 to 117133720 37866 + protein coding gene beta-carotene oxygenase 1
Tssr79578 8 117095859 to 117095875 16 + TSS region transcription start site region 79578
Tssr79579 8 117115840 to 117115844 4 + TSS region transcription start site region 79579
Gm20694 8 117125335 to 117125738 403 + pseudogene predicted gene 20694
Cpgi21096 8 117157294 to 117158870 1576 CpG island CpG island 21096
Tssr83093 8 117157785 to 117157803 18 - TSS region transcription start site region 83093
Tssr79580 8 117157950 to 117157967 17 + TSS region transcription start site region 79580
Tssr79581 8 117157972 to 117158035 63 + TSS region transcription start site region 79581
Gan 8 117158135 to 117205186 47051 + protein coding gene giant axonal neuropathy
Tssr83094 8 117158493 to 117158528 35 - TSS region transcription start site region 83094
D8Mit167 8 117238570 to 117238700 130 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 167
Fbtq3 8 117238570 to 117238700 130 QTL femoral bone trait QTL 3
Bmd39 8 117238700 to 32016544 -85222156 QTL bone mineral density 39
Cpgi21097 8 117256077 to 117257668 1591 CpG island CpG island 21097
Tssr79582 8 117256659 to 117256724 65 + TSS region transcription start site region 79582
Tssr79583 8 117256733 to 117256755 22 + TSS region transcription start site region 79583
Tssr79584 8 117256798 to 117256803 5 + TSS region transcription start site region 79584
Tssr79585 8 117256810 to 117256829 19 + TSS region transcription start site region 79585
Tssr79586 8 117256848 to 117256877 29 + TSS region transcription start site region 79586
Cmip 8 117257064 to 117459430 202366 + protein coding gene c-Maf inducing protein
Tssr79587 8 117257082 to 117257107 25 + TSS region transcription start site region 79587
Tssr79588 8 117257136 to 117257147 11 + TSS region transcription start site region 79588
Tssr83095 8 117258027 to 117258031 4 - TSS region transcription start site region 83095
A130010C12Rik 8 117258078 to 117260799 2721 unclassified gene RIKEN cDNA A130010C12 gene
Tssr79589 8 117258102 to 117258103 1 + TSS region transcription start site region 79589
Tssr79590 8 117265904 to 117265909 5 + TSS region transcription start site region 79590
Tssr79591 8 117266073 to 117266091 18 + TSS region transcription start site region 79591
Tssr79592 8 117274675 to 117274709 34 + TSS region transcription start site region 79592
Tssr79593 8 117275083 to 117275097 14 + TSS region transcription start site region 79593
Tssr79594 8 117275117 to 117275132 15 + TSS region transcription start site region 79594
Tssr79595 8 117275137 to 117275174 37 + TSS region transcription start site region 79595
Tssr79596 8 117275197 to 117275215 18 + TSS region transcription start site region 79596
4930572C08Rik 8 117290668 to 117292196 1528 unclassified gene RIKEN cDNA 4930572C08 gene