Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:116893439-117093456

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cmc2 8 116888685 to 116921455 32770 - protein coding gene COX assembly mitochondrial protein 2
Tssr83081 8 116894764 to 116894775 11 - TSS region transcription start site region 83081
Cpgi21091 8 116920985 to 116922162 1177 CpG island CpG island 21091
Tssr83082 8 116921378 to 116921392 14 - TSS region transcription start site region 83082
Tssr83083 8 116921408 to 116921451 43 - TSS region transcription start site region 83083
Tssr79571 8 116921715 to 116921733 18 + TSS region transcription start site region 79571
Cenpn 8 116921730 to 116941507 19777 + protein coding gene centromere protein N
Tssr79572 8 116921735 to 116921752 17 + TSS region transcription start site region 79572
Tssr79573 8 116921754 to 116921763 9 + TSS region transcription start site region 79573
Cpgi21092 8 116943147 to 116944368 1221 CpG island CpG island 21092
Tssr79574 8 116943387 to 116943424 37 + TSS region transcription start site region 79574
Atmin 8 116943393 to 116960445 17052 + protein coding gene ATM interactor
Tssr83084 8 116944100 to 116944129 29 - TSS region transcription start site region 83084
Tssr83085 8 116944182 to 116944195 13 - TSS region transcription start site region 83085
Tssr83086 8 116944324 to 116944330 6 - TSS region transcription start site region 83086
Tssr83087 8 116944373 to 116944384 11 - TSS region transcription start site region 83087
1700030J22Rik 8 116969599 to 116978954 9355 - protein coding gene RIKEN cDNA 1700030J22 gene
Cpgi21093 8 116978456 to 116979471 1015 CpG island CpG island 21093
Tssr83088 8 116978882 to 116978906 24 - TSS region transcription start site region 83088
Tssr83089 8 116978908 to 116978997 89 - TSS region transcription start site region 83089
Tssr79575 8 116979084 to 116979109 25 + TSS region transcription start site region 79575
Gcsh 8 116981828 to 116993449 11621 - protein coding gene glycine cleavage system protein H (aminomethyl carrier)
Cpgi21094 8 116992838 to 116993881 1043 CpG island CpG island 21094
Tssr83090 8 116993439 to 116993456 17 - TSS region transcription start site region 83090
Tssr83091 8 116993459 to 116993538 79 - TSS region transcription start site region 83091
Pkd1l2 8 116995679 to 117082449 86770 - protein coding gene polycystic kidney disease 1 like 2
Gm31519 8 117019043 to 117021941 2898 + lncRNA gene predicted gene, 31519
Cpgi21095 8 117028520 to 117028715 195 CpG island CpG island 21095
Gm15395 8 117036497 to 117043639 7142 + antisense lncRNA gene predicted gene 15395
Tssr79576 8 117051034 to 117051050 16 + TSS region transcription start site region 79576
Tssr79577 8 117055428 to 117055471 43 + TSS region transcription start site region 79577
Tssr83092 8 117068159 to 117068207 48 - TSS region transcription start site region 83092
Tssr2696 8 117074883 to 117074895 12 + TSS region transcription start site region 2696