Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:11678169-11778256

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700016D06Rik 8 11654921 to 11678750 23829 - protein coding gene RIKEN cDNA 1700016D06 gene
Tssr80395 8 11678696 to 11678706 10 - TSS region transcription start site region 80395
Tssr80396 8 11678710 to 11678726 16 - TSS region transcription start site region 80396
Tssr80397 8 11678728 to 11678754 26 - TSS region transcription start site region 80397
4930465I24Rik 8 11678808 to 11682211 3403 + antisense lncRNA gene RIKEN cDNA 4930465I24 gene
Gm7600 8 11683459 to 11684243 784 - pseudogene predicted gene 7600
Gm6524 8 11693042 to 11694484 1442 - pseudogene predicted gene 6524
Gm27854 8 11696615 to 11696858 243 - unclassified non-coding RNA gene predicted gene, 27854
D8Mit173 8 11700914 to 11701043 129 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 173
D8Mit173.1 8 11700989 to 11701185 196 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 173.1
Tssr76232 8 11713259 to 11713268 9 + TSS region transcription start site region 76232
1700128E19Rik 8 11713260 to 11720542 7282 + lincRNA gene RIKEN cDNA 1700128E19 gene
Tssr76233 8 11713274 to 11713287 13 + TSS region transcription start site region 76233
Gm45420 8 11714815 to 11715239 424 - pseudogene predicted gene 45420
Tssr80398 8 11715272 to 11715283 11 - TSS region transcription start site region 80398
4933413I22Rik 8 11726064 to 11727374 1310 unclassified gene RIKEN cDNA 4933413I22 gene
Cpgi20088 8 11727226 to 11729170 1944 CpG island CpG island 20088
Tssr76234 8 11727817 to 11727831 14 + TSS region transcription start site region 76234
Tssr76235 8 11727945 to 11727967 22 + TSS region transcription start site region 76235
Tssr76236 8 11728012 to 11728037 25 + TSS region transcription start site region 76236
Tssr76237 8 11728040 to 11728068 28 + TSS region transcription start site region 76237
Tssr76238 8 11728070 to 11728095 25 + TSS region transcription start site region 76238
Tssr76239 8 11728105 to 11728143 38 + TSS region transcription start site region 76239
Arhgef7 8 11728105 to 11835219 107114 + protein coding gene Rho guanine nucleotide exchange factor (GEF7)
Tssr76240 8 11728169 to 11728256 87 + TSS region transcription start site region 76240
D8Mit256 8 11736449 to 11736555 106 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 256
Gm18991 8 11738621 to 11739363 742 + pseudogene predicted gene, 18991
Gm46031 8 11750648 to 11772803 22155 - lncRNA gene predicted gene, 46031
Tssr76241 8 11756185 to 11756189 4 + TSS region transcription start site region 76241
Cpgi20089 8 11757666 to 11759114 1448 CpG island CpG island 20089
Tssr2489 8 11758250 to 11758262 12 - TSS region transcription start site region 2489
Tssr76242 8 11758329 to 11758375 46 + TSS region transcription start site region 76242
Tssr76243 8 11758380 to 11758412 32 + TSS region transcription start site region 76243