Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:116519400-116787991

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39258 8 116527885 to 116529401 1516 - lncRNA gene predicted gene, 39258
D8Mit186 8 116528649 to 116528783 134 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 186
Tssr83064 8 116529385 to 116529392 7 - TSS region transcription start site region 83064
Tssr83065 8 116529414 to 116529422 8 - TSS region transcription start site region 83065
Tssr83066 8 116529442 to 116529449 7 - TSS region transcription start site region 83066
Tssr79568 8 116537980 to 116537983 3 + TSS region transcription start site region 79568
Tssr83067 8 116571888 to 116571892 4 - TSS region transcription start site region 83067
Tssr83068 8 116573962 to 116573965 3 - TSS region transcription start site region 83068
Cdyl2 8 116574400 to 116732991 158591 - protein coding gene chromodomain protein, Y chromosome-like 2
Gm31367 8 116605918 to 116610520 4602 + lncRNA gene predicted gene, 31367
Tssr79569 8 116605947 to 116605955 8 + TSS region transcription start site region 79569
Tssr83069 8 116616346 to 116616350 4 - TSS region transcription start site region 83069
Tssr83070 8 116673160 to 116673186 26 - TSS region transcription start site region 83070
Tssr83071 8 116677809 to 116677823 14 - TSS region transcription start site region 83071
Tssr83072 8 116677953 to 116677967 14 - TSS region transcription start site region 83072
Tssr83073 8 116708155 to 116708159 4 - TSS region transcription start site region 83073
Tssr83074 8 116711467 to 116711510 43 - TSS region transcription start site region 83074
Tssr83075 8 116713855 to 116713864 9 - TSS region transcription start site region 83075
D8Mit360 8 116721188 to 116721362 174 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 360
Cpgi21088 8 116732017 to 116733801 1784 CpG island CpG island 21088
Tssr83076 8 116732827 to 116732899 72 - TSS region transcription start site region 83076
Tssr83077 8 116733061 to 116733076 15 - TSS region transcription start site region 83077
Tssr83078 8 116733255 to 116733314 59 - TSS region transcription start site region 83078
Tssr83079 8 116733323 to 116733354 31 - TSS region transcription start site region 83079
Gm10620 8 116764144 to 116765479 1335 - pseudogene predicted gene 10620
D8Mit90 8 116778937 to 116779094 157 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 90
4930563M20Rik 8 116781712 to 116801412 19700 - lncRNA gene RIKEN cDNA 4930563M20 gene