Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:115706451-116662369

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Maf 8 115703253 to 115706894 3641 - protein coding gene avian musculoaponeurotic fibrosarcoma oncogene homolog
Gm15655 8 115705078 to 115707233 2155 + antisense lncRNA gene predicted gene 15655
Cpgi21086 8 115705609 to 115708464 2855 CpG island CpG island 21086
Tssr83048 8 115706700 to 115706711 11 - TSS region transcription start site region 83048
Tssr83049 8 115706727 to 115706759 32 - TSS region transcription start site region 83049
Tssr83050 8 115706947 to 115706956 9 - TSS region transcription start site region 83050
Tssr83051 8 115706966 to 115706991 25 - TSS region transcription start site region 83051
Tssr83052 8 115706994 to 115707018 24 - TSS region transcription start site region 83052
Tssr83053 8 115707188 to 115707272 84 - TSS region transcription start site region 83053
Tssr83054 8 115707278 to 115707338 60 - TSS region transcription start site region 83054
Tssr79557 8 115707426 to 115707509 83 + TSS region transcription start site region 79557
Tssr83055 8 115707450 to 115707485 35 - TSS region transcription start site region 83055
Tssr83056 8 115707568 to 115707609 41 - TSS region transcription start site region 83056
Tssr83057 8 115707615 to 115707637 22 - TSS region transcription start site region 83057
Tssr79558 8 115707616 to 115707634 18 + TSS region transcription start site region 79558
Tssr83058 8 115707778 to 115707792 14 - TSS region transcription start site region 83058
Tssr83059 8 115707805 to 115707822 17 - TSS region transcription start site region 83059
Tssr83060 8 115707823 to 115707840 17 - TSS region transcription start site region 83060
Tssr79559 8 115707981 to 115707987 6 + TSS region transcription start site region 79559
Tssr79560 8 115708504 to 115708529 25 + TSS region transcription start site region 79560
Tssr83061 8 115713512 to 115713520 8 - TSS region transcription start site region 83061
Gm30712 8 115715872 to 115730008 14136 + lncRNA gene predicted gene, 30712
Tssr79561 8 115715919 to 115715924 5 + TSS region transcription start site region 79561
D8Mit321 8 115740378 to 115740484 106 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 321
4930509E22Rik 8 115770860 to 115771962 1102 unclassified gene RIKEN cDNA 4930509E22 gene
Gm30925 8 115830224 to 115841969 11745 + lncRNA gene predicted gene, 30925
Tssr79562 8 115830513 to 115830524 11 + TSS region transcription start site region 79562
Tssr79563 8 115830529 to 115830540 11 + TSS region transcription start site region 79563
Gm31037 8 115856253 to 115869493 13240 + lncRNA gene predicted gene, 31037
D8Mit215 8 115860738 to 115860915 177 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 215
Gm31106 8 115872900 to 115878136 5236 + lncRNA gene predicted gene, 31106
Gm31164 8 115904142 to 115906537 2395 - lncRNA gene predicted gene, 31164
Gm45733 8 115971635 to 115972071 436 - lincRNA gene predicted gene 45733
D8Mit272 8 116006485 to 116006595 110 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 272
Sluc9 8 116101792 to 116101929 137 QTL susceptibility to lung cancer 9
D8Mit35 8 116101792 to 116101929 137 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 35
Im1 8 116101792 to 116101929 137 QTL Immunoregulatory 1
Tssr79564 8 116126916 to 116126927 11 + TSS region transcription start site region 79564
4930422C21Rik 8 116181451 to 116187369 5918 - lincRNA gene RIKEN cDNA 4930422C21 gene
Gm31225 8 116190682 to 116192533 1851 + lncRNA gene predicted gene, 31225
Gm31278 8 116243515 to 116352435 108920 - lncRNA gene predicted gene, 31278
D8Mit89 8 116333216 to 116333346 130 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 89
1700018P08Rik 8 116357061 to 116359550 2489 + lincRNA gene RIKEN cDNA 1700018P08 gene
Tssr83062 8 116435720 to 116435732 12 - TSS region transcription start site region 83062
Tssr83063 8 116435763 to 116435774 11 - TSS region transcription start site region 83063
Cpgi21087 8 116480714 to 116480900 186 CpG island CpG island 21087
Gm5357 8 116489186 to 116491109 1923 + pseudogene predicted gene 5357
Gm9058 8 116501698 to 116502572 874 + pseudogene predicted gene 9058
Tssr79565 8 116501700 to 116501705 5 + TSS region transcription start site region 79565
Tssr79566 8 116504966 to 116504967 1 + TSS region transcription start site region 79566
Tssr79567 8 116504973 to 116505023 50 + TSS region transcription start site region 79567
Dynlrb2 8 116505015 to 116515915 10900 + protein coding gene dynein light chain roadblock-type 2
Gm39258 8 116527885 to 116529401 1516 - lncRNA gene predicted gene, 39258
D8Mit186 8 116528649 to 116528783 134 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 186
Tssr83064 8 116529385 to 116529392 7 - TSS region transcription start site region 83064
Tssr83065 8 116529414 to 116529422 8 - TSS region transcription start site region 83065
Tssr83066 8 116529442 to 116529449 7 - TSS region transcription start site region 83066
Tssr79568 8 116537980 to 116537983 3 + TSS region transcription start site region 79568
Tssr83067 8 116571888 to 116571892 4 - TSS region transcription start site region 83067
Tssr83068 8 116573962 to 116573965 3 - TSS region transcription start site region 83068
Cdyl2 8 116574400 to 116732991 158591 - protein coding gene chromodomain protein, Y chromosome-like 2
Gm31367 8 116605918 to 116610520 4602 + lncRNA gene predicted gene, 31367
Tssr79569 8 116605947 to 116605955 8 + TSS region transcription start site region 79569
Tssr83069 8 116616346 to 116616350 4 - TSS region transcription start site region 83069