Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:114880662-116530673

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121 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pgia22 8 101759576 to 115298718 13539142 QTL proteoglycan induced arthritis 22
Wwox 8 114439655 to 115352708 913053 + protein coding gene WW domain-containing oxidoreductase
Gm39257 8 114952104 to 114962544 10440 - lncRNA gene predicted gene, 39257
Tssr79549 8 114973375 to 114973390 15 + TSS region transcription start site region 79549
3100003L13Rik 8 114976710 to 114978179 1469 unclassified gene RIKEN cDNA 3100003L13 gene
Tssr83010 8 114978922 to 114978923 1 - TSS region transcription start site region 83010
Tssr79550 8 114987849 to 114987850 1 + TSS region transcription start site region 79550
Tssr83011 8 115018966 to 115018982 16 - TSS region transcription start site region 83011
Gm22556 8 115052814 to 115052913 99 - rRNA gene predicted gene, 22556
D8Mit273 8 115103447 to 115103663 216 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 273
Tssr79551 8 115110186 to 115110188 2 + TSS region transcription start site region 79551
Tssr79552 8 115110932 to 115110936 4 + TSS region transcription start site region 79552
Tssr79553 8 115134423 to 115134427 4 + TSS region transcription start site region 79553
Tssr79554 8 115186665 to 115186668 3 + TSS region transcription start site region 79554
Tssr79555 8 115190248 to 115190251 3 + TSS region transcription start site region 79555
Tssr2694 8 115194891 to 115194892 1 + TSS region transcription start site region 2694
Tssr79556 8 115251474 to 115251477 3 + TSS region transcription start site region 79556
D8Mit214 8 115291869 to 115292004 135 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 214
D8Mit320 8 115298594 to 115298718 124 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 320
D8Mit244 8 115324203 to 115324373 170 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 244
Tssr83012 8 115411899 to 115411940 41 - TSS region transcription start site region 83012
Cpgi21085 8 115517800 to 115517977 177 CpG island CpG island 21085
D8Mit243 8 115540959 to 115541083 124 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 243
4930488N15Rik 8 115585392 to 115595152 9760 + lincRNA gene RIKEN cDNA 4930488N15 gene
Gm23677 8 115591170 to 115591273 103 - snRNA gene predicted gene, 23677
Gm39256 8 115635165 to 115644889 9724 - lncRNA gene predicted gene, 39256
D8Dcr41 8 115686886 to 115686986 100 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 41
6030439D06Rik 8 115687723 to 115692319 4596 unclassified gene RIKEN cDNA 6030439D06 gene
Tssr83013 8 115693798 to 115693804 6 - TSS region transcription start site region 83013
Tssr83014 8 115695271 to 115695308 37 - TSS region transcription start site region 83014
Tssr83015 8 115695964 to 115695967 3 - TSS region transcription start site region 83015
Tssr83016 8 115703037 to 115703059 22 - TSS region transcription start site region 83016
Tssr83017 8 115703107 to 115703133 26 - TSS region transcription start site region 83017
Tssr83018 8 115703139 to 115703159 20 - TSS region transcription start site region 83018
Maf 8 115703253 to 115706894 3641 - protein coding gene avian musculoaponeurotic fibrosarcoma oncogene homolog
Tssr83019 8 115703545 to 115703564 19 - TSS region transcription start site region 83019
Tssr83020 8 115703750 to 115703764 14 - TSS region transcription start site region 83020
Tssr83021 8 115703797 to 115703813 16 - TSS region transcription start site region 83021
Tssr83022 8 115703828 to 115703839 11 - TSS region transcription start site region 83022
Tssr83023 8 115703958 to 115703970 12 - TSS region transcription start site region 83023
Tssr83024 8 115704156 to 115704183 27 - TSS region transcription start site region 83024
Tssr83025 8 115704284 to 115704317 33 - TSS region transcription start site region 83025
Tssr83026 8 115704379 to 115704391 12 - TSS region transcription start site region 83026
Tssr83027 8 115704405 to 115704427 22 - TSS region transcription start site region 83027
Tssr83028 8 115704733 to 115704768 35 - TSS region transcription start site region 83028
Tssr83029 8 115704844 to 115704847 3 - TSS region transcription start site region 83029
Tssr83030 8 115704939 to 115704959 20 - TSS region transcription start site region 83030
Tssr83031 8 115705039 to 115705042 3 - TSS region transcription start site region 83031
Gm15655 8 115705078 to 115707233 2155 + antisense lncRNA gene predicted gene 15655
Tssr83032 8 115705099 to 115705113 14 - TSS region transcription start site region 83032
Tssr83033 8 115705182 to 115705193 11 - TSS region transcription start site region 83033
Tssr83034 8 115705217 to 115705235 18 - TSS region transcription start site region 83034
Tssr83035 8 115705265 to 115705276 11 - TSS region transcription start site region 83035
Tssr83036 8 115705295 to 115705306 11 - TSS region transcription start site region 83036
Tssr83037 8 115705317 to 115705344 27 - TSS region transcription start site region 83037
Tssr83038 8 115705348 to 115705361 13 - TSS region transcription start site region 83038
Tssr83039 8 115705384 to 115705399 15 - TSS region transcription start site region 83039
Tssr83040 8 115705461 to 115705514 53 - TSS region transcription start site region 83040
Cpgi21086 8 115705609 to 115708464 2855 CpG island CpG island 21086
Tssr83041 8 115705616 to 115705634 18 - TSS region transcription start site region 83041
Tssr83042 8 115705643 to 115705654 11 - TSS region transcription start site region 83042
Tssr83043 8 115705662 to 115705673 11 - TSS region transcription start site region 83043
Tssr83044 8 115705698 to 115705706 8 - TSS region transcription start site region 83044
Tssr2695 8 115705889 to 115705900 11 - TSS region transcription start site region 2695
Tssr83045 8 115705902 to 115705979 77 - TSS region transcription start site region 83045
Tssr83046 8 115705986 to 115705997 11 - TSS region transcription start site region 83046
Tssr83047 8 115706099 to 115706119 20 - TSS region transcription start site region 83047
Tssr83048 8 115706700 to 115706711 11 - TSS region transcription start site region 83048
Tssr83049 8 115706727 to 115706759 32 - TSS region transcription start site region 83049
Tssr83050 8 115706947 to 115706956 9 - TSS region transcription start site region 83050
Tssr83051 8 115706966 to 115706991 25 - TSS region transcription start site region 83051
Tssr83052 8 115706994 to 115707018 24 - TSS region transcription start site region 83052
Tssr83053 8 115707188 to 115707272 84 - TSS region transcription start site region 83053
Tssr83054 8 115707278 to 115707338 60 - TSS region transcription start site region 83054
Tssr79557 8 115707426 to 115707509 83 + TSS region transcription start site region 79557
Tssr83055 8 115707450 to 115707485 35 - TSS region transcription start site region 83055
Tssr83056 8 115707568 to 115707609 41 - TSS region transcription start site region 83056
Tssr83057 8 115707615 to 115707637 22 - TSS region transcription start site region 83057
Tssr79558 8 115707616 to 115707634 18 + TSS region transcription start site region 79558
Tssr83058 8 115707778 to 115707792 14 - TSS region transcription start site region 83058
Tssr83059 8 115707805 to 115707822 17 - TSS region transcription start site region 83059
Tssr83060 8 115707823 to 115707840 17 - TSS region transcription start site region 83060
Tssr79559 8 115707981 to 115707987 6 + TSS region transcription start site region 79559
Tssr79560 8 115708504 to 115708529 25 + TSS region transcription start site region 79560
Tssr83061 8 115713512 to 115713520 8 - TSS region transcription start site region 83061
Gm30712 8 115715872 to 115730008 14136 + lncRNA gene predicted gene, 30712
Tssr79561 8 115715919 to 115715924 5 + TSS region transcription start site region 79561
D8Mit321 8 115740378 to 115740484 106 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 321
4930509E22Rik 8 115770860 to 115771962 1102 unclassified gene RIKEN cDNA 4930509E22 gene
Gm30925 8 115830224 to 115841969 11745 + lncRNA gene predicted gene, 30925
Tssr79562 8 115830513 to 115830524 11 + TSS region transcription start site region 79562
Tssr79563 8 115830529 to 115830540 11 + TSS region transcription start site region 79563
Gm31037 8 115856253 to 115869493 13240 + lncRNA gene predicted gene, 31037
D8Mit215 8 115860738 to 115860915 177 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 215
Gm31106 8 115872900 to 115878136 5236 + lncRNA gene predicted gene, 31106
Gm31164 8 115904142 to 115906537 2395 - lncRNA gene predicted gene, 31164
Gm45733 8 115971635 to 115972071 436 - lincRNA gene predicted gene 45733
D8Mit272 8 116006485 to 116006595 110 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 272
D8Mit35 8 116101792 to 116101929 137 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 35
Sluc9 8 116101792 to 116101929 137 QTL susceptibility to lung cancer 9
Im1 8 116101792 to 116101929 137 QTL Immunoregulatory 1
Tssr79564 8 116126916 to 116126927 11 + TSS region transcription start site region 79564
4930422C21Rik 8 116181451 to 116187369 5918 - lincRNA gene RIKEN cDNA 4930422C21 gene
Gm31225 8 116190682 to 116192533 1851 + lncRNA gene predicted gene, 31225
Gm31278 8 116243515 to 116352435 108920 - lncRNA gene predicted gene, 31278
D8Mit89 8 116333216 to 116333346 130 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 89
1700018P08Rik 8 116357061 to 116359550 2489 + lincRNA gene RIKEN cDNA 1700018P08 gene
Tssr83062 8 116435720 to 116435732 12 - TSS region transcription start site region 83062
Tssr83063 8 116435763 to 116435774 11 - TSS region transcription start site region 83063
Cpgi21087 8 116480714 to 116480900 186 CpG island CpG island 21087
Gm5357 8 116489186 to 116491109 1923 + pseudogene predicted gene 5357
Gm9058 8 116501698 to 116502572 874 + pseudogene predicted gene 9058
Tssr79565 8 116501700 to 116501705 5 + TSS region transcription start site region 79565
Tssr79566 8 116504966 to 116504967 1 + TSS region transcription start site region 79566
Tssr79567 8 116504973 to 116505023 50 + TSS region transcription start site region 79567
Dynlrb2 8 116505015 to 116515915 10900 + protein coding gene dynein light chain roadblock-type 2
Gm39258 8 116527885 to 116529401 1516 - lncRNA gene predicted gene, 39258
D8Mit186 8 116528649 to 116528783 134 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 186
Tssr83064 8 116529385 to 116529392 7 - TSS region transcription start site region 83064
Tssr83065 8 116529414 to 116529422 8 - TSS region transcription start site region 83065
Tssr83066 8 116529442 to 116529449 7 - TSS region transcription start site region 83066