Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:114139712-114739736

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acigg9 8 102332498 to 114373932 12041434 QTL anti COL7 IgG2b antibody 9
Tpnr6 8 110440000 to 114230000 3790000 QTL thermal pain response 6
Nudt7 8 114133574 to 114154731 21157 + protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 7
Tssr79534 8 114147989 to 114148005 16 + TSS region transcription start site region 79534
Tssr79535 8 114151678 to 114151694 16 + TSS region transcription start site region 79535
BC024137 8 114153406 to 114154938 1532 unclassified gene cDNA sequence BC024137
Gm30272 8 114189017 to 114205589 16572 - lncRNA gene predicted gene, 30272
Cpgi21083 8 114205451 to 114206065 614 CpG island CpG island 21083
Tssr79536 8 114205574 to 114205585 11 + TSS region transcription start site region 79536
Tssr79537 8 114205590 to 114205642 52 + TSS region transcription start site region 79537
Vat1l 8 114205612 to 114374071 168459 + protein coding gene vesicle amine transport protein 1 like
D8Mit317 8 114207620 to 114207789 169 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 317
Tssr79538 8 114289365 to 114289388 23 + TSS region transcription start site region 79538
4933408N05Rik 8 114341161 to 114351478 10317 - antisense lncRNA gene RIKEN cDNA 4933408N05 gene
D8Mit271 8 114360122 to 114360217 95 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 271
Tssr79539 8 114417995 to 114418011 16 + TSS region transcription start site region 79539
Clec3a 8 114418086 to 114425846 7760 + protein coding gene C-type lectin domain family 3, member a
Gm30330 8 114423020 to 114435809 12789 - lncRNA gene predicted gene, 30330
Cpgi21084 8 114439424 to 114440183 759 CpG island CpG island 21084
Wwox 8 114439655 to 115352708 913053 + protein coding gene WW domain-containing oxidoreductase
Tssr79540 8 114439663 to 114439710 47 + TSS region transcription start site region 79540
Tssr79541 8 114439712 to 114439736 24 + TSS region transcription start site region 79541
D8Mit319 8 114530414 to 114530536 122 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 319
Gm16116 8 114591303 to 114594900 3597 - antisense lncRNA gene predicted gene 16116
Gm30554 8 114609330 to 114620211 10881 - lncRNA gene predicted gene, 30554
Gm16117 8 114639546 to 114642114 2568 - antisense lncRNA gene predicted gene 16117
D8Mit117 8 114645961 to 114646168 207 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 117
Tssr79542 8 114652075 to 114652085 10 + TSS region transcription start site region 79542
Fdr2 8 114663894 to 114664088 194 QTL fat response to dietary restriction 2
D8Mit200 8 114663894 to 114664088 194 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 200
Tssr79543 8 114683938 to 114683943 5 + TSS region transcription start site region 79543
Gm16118 8 114698439 to 114708006 9567 - antisense lncRNA gene predicted gene 16118
Tssr83009 8 114723346 to 114723355 9 - TSS region transcription start site region 83009