Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:113977740-115527741

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pgia22 8 101759576 to 115298718 13539142 QTL proteoglycan induced arthritis 22
Acigg9 8 102332498 to 114373932 12041434 QTL anti COL7 IgG2b antibody 9
Tpnr6 8 110440000 to 114230000 3790000 QTL thermal pain response 6
Gm30107 8 114010658 to 114081140 70482 - lncRNA gene predicted gene, 30107
Tssr83003 8 114013804 to 114013816 12 - TSS region transcription start site region 83003
Tssr83004 8 114014411 to 114014416 5 - TSS region transcription start site region 83004
Tssr83005 8 114090760 to 114090766 6 - TSS region transcription start site region 83005
Tssr83006 8 114130996 to 114131010 14 - TSS region transcription start site region 83006
Tssr83007 8 114131578 to 114131595 17 - TSS region transcription start site region 83007
Tssr83008 8 114131597 to 114131604 7 - TSS region transcription start site region 83008
Cpgi21082 8 114133450 to 114133692 242 CpG island CpG island 21082
Tssr79531 8 114133569 to 114133597 28 + TSS region transcription start site region 79531
Nudt7 8 114133574 to 114154731 21157 + protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 7
Tssr79532 8 114133601 to 114133630 29 + TSS region transcription start site region 79532
Tssr79533 8 114133635 to 114133662 27 + TSS region transcription start site region 79533
D8Mit139 8 114134951 to 114135096 145 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 139
Tssr79534 8 114147989 to 114148005 16 + TSS region transcription start site region 79534
Tssr79535 8 114151678 to 114151694 16 + TSS region transcription start site region 79535
BC024137 8 114153406 to 114154938 1532 unclassified gene cDNA sequence BC024137
Gm30272 8 114189017 to 114205589 16572 - lncRNA gene predicted gene, 30272
Cpgi21083 8 114205451 to 114206065 614 CpG island CpG island 21083
Tssr79536 8 114205574 to 114205585 11 + TSS region transcription start site region 79536
Tssr79537 8 114205590 to 114205642 52 + TSS region transcription start site region 79537
Vat1l 8 114205612 to 114374071 168459 + protein coding gene vesicle amine transport protein 1 like
D8Mit317 8 114207620 to 114207789 169 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 317
Tssr79538 8 114289365 to 114289388 23 + TSS region transcription start site region 79538
4933408N05Rik 8 114341161 to 114351478 10317 - antisense lncRNA gene RIKEN cDNA 4933408N05 gene
D8Mit271 8 114360122 to 114360217 95 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 271
Tssr79539 8 114417995 to 114418011 16 + TSS region transcription start site region 79539
Clec3a 8 114418086 to 114425846 7760 + protein coding gene C-type lectin domain family 3, member a
Gm30330 8 114423020 to 114435809 12789 - lncRNA gene predicted gene, 30330
Cpgi21084 8 114439424 to 114440183 759 CpG island CpG island 21084
Wwox 8 114439655 to 115352708 913053 + protein coding gene WW domain-containing oxidoreductase
Tssr79540 8 114439663 to 114439710 47 + TSS region transcription start site region 79540
Tssr79541 8 114439712 to 114439736 24 + TSS region transcription start site region 79541
D8Mit319 8 114530414 to 114530536 122 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 319
Gm16116 8 114591303 to 114594900 3597 - antisense lncRNA gene predicted gene 16116
Gm30554 8 114609330 to 114620211 10881 - lncRNA gene predicted gene, 30554
Gm16117 8 114639546 to 114642114 2568 - antisense lncRNA gene predicted gene 16117
D8Mit117 8 114645961 to 114646168 207 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 117
Tssr79542 8 114652075 to 114652085 10 + TSS region transcription start site region 79542
Fdr2 8 114663894 to 114664088 194 QTL fat response to dietary restriction 2
D8Mit200 8 114663894 to 114664088 194 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 200
Tssr79543 8 114683938 to 114683943 5 + TSS region transcription start site region 79543
Gm16118 8 114698439 to 114708006 9567 - antisense lncRNA gene predicted gene 16118
Tssr83009 8 114723346 to 114723355 9 - TSS region transcription start site region 83009
Tssr79544 8 114746767 to 114746771 4 + TSS region transcription start site region 79544
Tssr79545 8 114752740 to 114752741 1 + TSS region transcription start site region 79545
Tssr79546 8 114772956 to 114772958 2 + TSS region transcription start site region 79546
D8Ertd107e 8 114789821 to 114790070 249 DNA segment DNA segment, Chr 8, ERATO Doi 107, expressed
D8Mit116 8 114790746 to 114790856 110 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 116
Tssr79547 8 114815583 to 114815605 22 + TSS region transcription start site region 79547
D8Mit88 8 114836895 to 114837007 112 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 88
Lith11 8 114836895 to 114837007 112 QTL lithogenic gene 11
Eae31 8 114837007 to 34642776 -80194231 QTL experimental allergic encephalomyelitis susceptibility 31
Tssr79548 8 114869569 to 114869572 3 + TSS region transcription start site region 79548
Gm39257 8 114952104 to 114962544 10440 - lncRNA gene predicted gene, 39257
Tssr79549 8 114973375 to 114973390 15 + TSS region transcription start site region 79549
3100003L13Rik 8 114976710 to 114978179 1469 unclassified gene RIKEN cDNA 3100003L13 gene
Tssr83010 8 114978922 to 114978923 1 - TSS region transcription start site region 83010
Tssr79550 8 114987849 to 114987850 1 + TSS region transcription start site region 79550
Tssr83011 8 115018966 to 115018982 16 - TSS region transcription start site region 83011
Gm22556 8 115052814 to 115052913 99 - rRNA gene predicted gene, 22556
D8Mit273 8 115103447 to 115103663 216 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 273
Tssr79551 8 115110186 to 115110188 2 + TSS region transcription start site region 79551
Tssr79552 8 115110932 to 115110936 4 + TSS region transcription start site region 79552
Tssr79553 8 115134423 to 115134427 4 + TSS region transcription start site region 79553
Tssr79554 8 115186665 to 115186668 3 + TSS region transcription start site region 79554
Tssr79555 8 115190248 to 115190251 3 + TSS region transcription start site region 79555
Tssr2694 8 115194891 to 115194892 1 + TSS region transcription start site region 2694
Tssr79556 8 115251474 to 115251477 3 + TSS region transcription start site region 79556
D8Mit214 8 115291869 to 115292004 135 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 214
D8Mit320 8 115298594 to 115298718 124 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 320
D8Mit244 8 115324203 to 115324373 170 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 244
Tssr83012 8 115411899 to 115411940 41 - TSS region transcription start site region 83012
Cpgi21085 8 115517800 to 115517977 177 CpG island CpG island 21085