Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:112582262-113578334

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cntnap4 8 112570043 to 112882717 312674 + protein coding gene contactin associated protein-like 4
D8Mit199 8 112595466 to 112595612 146 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 199
Tssr79520 8 112698444 to 112698459 15 + TSS region transcription start site region 79520
D8Mit152 8 112717319 to 112717565 246 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 152
D8Mit353 8 112784365 to 112784479 114 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 353
D8Mit270 8 112850476 to 112850598 122 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 270
Cpgi21078 8 112854023 to 112854548 525 CpG island CpG island 21078
Gm45904 8 112880460 to 113004997 124537 - antisense lncRNA gene predicted gene 45904
1110013I04Rik 8 112961447 to 112962559 1112 unclassified gene RIKEN cDNA 1110013I04 gene
Gm10280 8 113067262 to 113093334 26072 + lincRNA gene predicted gene 10280
Gm29896 8 113134783 to 113140159 5376 - lncRNA gene predicted gene, 29896
Gm29955 8 113372042 to 113425842 53800 - lncRNA gene predicted gene, 29955
Cpgi21079 8 113497600 to 113497776 176 CpG island CpG island 21079
4930571O06Rik 8 113517282 to 113550808 33526 + lncRNA gene RIKEN cDNA 4930571O06 gene
Gm25766 8 113519476 to 113519606 130 - snoRNA gene predicted gene, 25766
Gm24291 8 113528510 to 113528671 161 - snRNA gene predicted gene, 24291
Tssr82993 8 113528672 to 113528673 1 - TSS region transcription start site region 82993
Gm46064 8 113563320 to 113573617 10297 - pseudogene predicted gene, 46064
Tssr79521 8 113572681 to 113572685 4 + TSS region transcription start site region 79521