Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:112020043-113432717

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Terf2ip 8 112011398 to 112020528 9130 + protein coding gene telomeric repeat binding factor 2, interacting protein
Gm9564 8 112024933 to 112027351 2418 - protein coding gene predicted gene 9564
Tssr82990 8 112030814 to 112030845 31 - TSS region transcription start site region 82990
Tssr82991 8 112030875 to 112030914 39 - TSS region transcription start site region 82991
Tssr82992 8 112032341 to 112032359 18 - TSS region transcription start site region 82992
Gm36671 8 112061572 to 112063676 2104 + lncRNA gene predicted gene, 36671
Gm22827 8 112062505 to 112062611 106 + snRNA gene predicted gene, 22827
D8Mit165 8 112148433 to 112148534 101 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 165
Gm3635 8 112236613 to 112236966 353 - pseudogene predicted gene 3635
Gm39253 8 112293848 to 112297155 3307 - lncRNA gene predicted gene, 39253
Gm39254 8 112472122 to 112475506 3384 - lncRNA gene predicted gene, 39254
Gm26994 8 112554617 to 112569575 14958 - antisense lncRNA gene predicted gene, 26994
Cpgi21077 8 112569654 to 112569812 158 CpG island CpG island 21077
Tssr79517 8 112569827 to 112569856 29 + TSS region transcription start site region 79517
Tssr79518 8 112570021 to 112570039 18 + TSS region transcription start site region 79518
Tssr79519 8 112570043 to 112570060 17 + TSS region transcription start site region 79519
Cntnap4 8 112570043 to 112882717 312674 + protein coding gene contactin associated protein-like 4
Gm22664 8 112581636 to 112581740 104 + unclassified non-coding RNA gene predicted gene, 22664
D8Mit199 8 112595466 to 112595612 146 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 199
Tssr79520 8 112698444 to 112698459 15 + TSS region transcription start site region 79520
D8Mit152 8 112717319 to 112717565 246 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 152
D8Mit353 8 112784365 to 112784479 114 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 353
D8Mit270 8 112850476 to 112850598 122 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 270
Cpgi21078 8 112854023 to 112854548 525 CpG island CpG island 21078
Gm45904 8 112880460 to 113004997 124537 - antisense lncRNA gene predicted gene 45904
1110013I04Rik 8 112961447 to 112962559 1112 unclassified gene RIKEN cDNA 1110013I04 gene
Gm10280 8 113067262 to 113093334 26072 + lincRNA gene predicted gene 10280
Gm29896 8 113134783 to 113140159 5376 - lncRNA gene predicted gene, 29896
Gm29955 8 113372042 to 113425842 53800 - lncRNA gene predicted gene, 29955