Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:111749238-111959266

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39252 8 111748667 to 111754711 6044 - lncRNA gene predicted gene, 39252
Cpgi21067 8 111752253 to 111752468 215 CpG island CpG island 21067
Cfdp1 8 111768491 to 111854291 85800 - protein coding gene craniofacial development protein 1
Cpgi21068 8 111853722 to 111854519 797 CpG island CpG island 21068
Tssr82980 8 111854238 to 111854266 28 - TSS region transcription start site region 82980
Tssr82981 8 111854278 to 111854356 78 - TSS region transcription start site region 82981
Cpgi21069 8 111856152 to 111856360 208 CpG island CpG island 21069
Tmem170 8 111863038 to 111876750 13712 - protein coding gene transmembrane protein 170
Tssr82982 8 111864037 to 111864040 3 - TSS region transcription start site region 82982
Cpgi21070 8 111876254 to 111877040 786 CpG island CpG island 21070
Tssr82983 8 111876661 to 111876725 64 - TSS region transcription start site region 82983
Gm23853 8 111879304 to 111879407 103 + snRNA gene predicted gene, 23853
Chst5 8 111889135 to 111910199 21064 - protein coding gene carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5
Cpgi21071 8 111889813 to 111891003 1190 CpG island CpG island 21071
Cpgi21072 8 111909748 to 111910441 693 CpG island CpG island 21072
Tssr82984 8 111910171 to 111910190 19 - TSS region transcription start site region 82984
Tmem231 8 111912011 to 111933818 21807 - protein coding gene transmembrane protein 231
Gm36531 8 111914116 to 111929092 14976 + lncRNA gene predicted gene, 36531
Tssr79508 8 111914144 to 111914154 10 + TSS region transcription start site region 79508
Cpgi21073 8 111933171 to 111933927 756 CpG island CpG island 21073
Tssr82985 8 111933761 to 111933816 55 - TSS region transcription start site region 82985
Cpgi21074 8 111940451 to 111941560 1109 CpG island CpG island 21074
Tssr79509 8 111940697 to 111940708 11 + TSS region transcription start site region 79509
Gabarapl2 8 111940703 to 111952915 12212 + protein coding gene gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
Tssr79510 8 111940710 to 111940739 29 + TSS region transcription start site region 79510
Tssr79511 8 111940746 to 111940756 10 + TSS region transcription start site region 79511
D8Ertd54e 8 111945832 to 111946053 221 DNA segment DNA segment, Chr 8, ERATO Doi 54, expressed