Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:111728491-111894291

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bcar1 8 111710474 to 111743809 33335 - protein coding gene breast cancer anti-estrogen resistance 1
Cpgi21065 8 111731214 to 111732523 1309 CpG island CpG island 21065
Tssr82976 8 111732078 to 111732084 6 - TSS region transcription start site region 82976
Tssr82977 8 111732091 to 111732146 55 - TSS region transcription start site region 82977
Cpgi21066 8 111743155 to 111744495 1340 CpG island CpG island 21066
Tssr82978 8 111743799 to 111743857 58 - TSS region transcription start site region 82978
Tssr82979 8 111743868 to 111743887 19 - TSS region transcription start site region 82979
Gm39252 8 111748667 to 111754711 6044 - lncRNA gene predicted gene, 39252
Cpgi21067 8 111752253 to 111752468 215 CpG island CpG island 21067
Cfdp1 8 111768491 to 111854291 85800 - protein coding gene craniofacial development protein 1
Cpgi21068 8 111853722 to 111854519 797 CpG island CpG island 21068
Tssr82980 8 111854238 to 111854266 28 - TSS region transcription start site region 82980
Tssr82981 8 111854278 to 111854356 78 - TSS region transcription start site region 82981
Cpgi21069 8 111856152 to 111856360 208 CpG island CpG island 21069
Tmem170 8 111863038 to 111876750 13712 - protein coding gene transmembrane protein 170
Tssr82982 8 111864037 to 111864040 3 - TSS region transcription start site region 82982
Cpgi21070 8 111876254 to 111877040 786 CpG island CpG island 21070
Tssr82983 8 111876661 to 111876725 64 - TSS region transcription start site region 82983
Gm23853 8 111879304 to 111879407 103 + snRNA gene predicted gene, 23853
Chst5 8 111889135 to 111910199 21064 - protein coding gene carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5
Cpgi21071 8 111889813 to 111891003 1190 CpG island CpG island 21071