Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:111567078-111897084

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Znrf1 8 111536640 to 111626030 89390 + protein coding gene zinc and ring finger 1
Tssr79487 8 111582647 to 111582652 5 + TSS region transcription start site region 79487
Tssr2690 8 111596094 to 111596107 13 + TSS region transcription start site region 2690
Tssr82941 8 111599914 to 111599921 7 - TSS region transcription start site region 82941
Tssr79488 8 111621686 to 111621692 6 + TSS region transcription start site region 79488
Ldhd 8 111626271 to 111630322 4051 - protein coding gene lactate dehydrogenase D
Tssr82942 8 111629156 to 111629169 13 - TSS region transcription start site region 82942
Tssr79489 8 111629848 to 111629852 4 + TSS region transcription start site region 79489
Tssr82943 8 111630325 to 111630344 19 - TSS region transcription start site region 82943
Cpgi21063 8 111643342 to 111644035 693 CpG island CpG island 21063
Zfp1 8 111643401 to 111671011 27610 + protein coding gene zinc finger protein 1
Tssr79490 8 111643425 to 111643450 25 + TSS region transcription start site region 79490
Tssr79491 8 111643456 to 111643490 34 + TSS region transcription start site region 79491
Tssr79492 8 111643493 to 111643540 47 + TSS region transcription start site region 79492
Tssr82944 8 111643877 to 111643897 20 - TSS region transcription start site region 82944
Tssr82945 8 111644297 to 111644325 28 - TSS region transcription start site region 82945
Tssr79493 8 111651579 to 111651598 19 + TSS region transcription start site region 79493
Tssr79494 8 111686513 to 111686526 13 + TSS region transcription start site region 79494
Ctrb1 8 111686519 to 111691010 4491 - protein coding gene chymotrypsinogen B1
Tssr82946 8 111686541 to 111686602 61 - TSS region transcription start site region 82946
Tssr79495 8 111686552 to 111686634 82 + TSS region transcription start site region 79495
Tssr82947 8 111686605 to 111686612 7 - TSS region transcription start site region 82947
Tssr82948 8 111686616 to 111686621 5 - TSS region transcription start site region 82948
Tssr82949 8 111686625 to 111686679 54 - TSS region transcription start site region 82949
Tssr79496 8 111686644 to 111686661 17 + TSS region transcription start site region 79496
Tssr79497 8 111686663 to 111686666 3 + TSS region transcription start site region 79497
Tssr79498 8 111686699 to 111686711 12 + TSS region transcription start site region 79498
Tssr82950 8 111686712 to 111686757 45 - TSS region transcription start site region 82950
Cpgi21064 8 111687023 to 111687193 170 CpG island CpG island 21064
Tssr79499 8 111687103 to 111687112 9 + TSS region transcription start site region 79499
Tssr79500 8 111687114 to 111687134 20 + TSS region transcription start site region 79500
Tssr82951 8 111687129 to 111687134 5 - TSS region transcription start site region 82951
Tssr82952 8 111687135 to 111687144 9 - TSS region transcription start site region 82952
Tssr79501 8 111687138 to 111687179 41 + TSS region transcription start site region 79501
Tssr82953 8 111687148 to 111687179 31 - TSS region transcription start site region 82953
Tssr82954 8 111687182 to 111687196 14 - TSS region transcription start site region 82954
Tssr2691 8 111687183 to 111687197 14 + TSS region transcription start site region 2691
Tssr82955 8 111687198 to 111687245 47 - TSS region transcription start site region 82955
Tssr79502 8 111687201 to 111687215 14 + TSS region transcription start site region 79502
Tssr82956 8 111688487 to 111688497 10 - TSS region transcription start site region 82956
Tssr79503 8 111688536 to 111688585 49 + TSS region transcription start site region 79503
Tssr82957 8 111688540 to 111688543 3 - TSS region transcription start site region 82957
Tssr82958 8 111688576 to 111688732 156 - TSS region transcription start site region 82958
Tssr79504 8 111688587 to 111688633 46 + TSS region transcription start site region 79504
Tssr79505 8 111688650 to 111688671 21 + TSS region transcription start site region 79505
Tssr79506 8 111689142 to 111689193 51 + TSS region transcription start site region 79506
Tssr82959 8 111689164 to 111689228 64 - TSS region transcription start site region 82959
Tssr2692 8 111689318 to 111689333 15 + TSS region transcription start site region 2692
Tssr82960 8 111689344 to 111689386 42 - TSS region transcription start site region 82960
Tssr82961 8 111689398 to 111689409 11 - TSS region transcription start site region 82961
Tssr82962 8 111689527 to 111689549 22 - TSS region transcription start site region 82962
Tssr82963 8 111689550 to 111689561 11 - TSS region transcription start site region 82963
Tssr82964 8 111689563 to 111689611 48 - TSS region transcription start site region 82964
Mir7076 8 111689601 to 111689674 73 - miRNA gene microRNA 7076
Tssr82965 8 111690309 to 111690333 24 - TSS region transcription start site region 82965
Tssr82966 8 111690363 to 111690382 19 - TSS region transcription start site region 82966
Tssr82967 8 111690442 to 111690454 12 - TSS region transcription start site region 82967
Tssr82968 8 111690698 to 111690709 11 - TSS region transcription start site region 82968
Tssr82969 8 111690759 to 111690765 6 - TSS region transcription start site region 82969
Tssr82970 8 111690855 to 111690864 9 - TSS region transcription start site region 82970
Tssr82971 8 111691002 to 111691019 17 - TSS region transcription start site region 82971
Tssr82972 8 111691128 to 111691141 13 - TSS region transcription start site region 82972
Tssr79507 8 111701811 to 111701818 7 + TSS region transcription start site region 79507
Bcar1 8 111710474 to 111743809 33335 - protein coding gene breast cancer anti-estrogen resistance 1
Tssr82973 8 111718597 to 111718601 4 - TSS region transcription start site region 82973
Tssr82974 8 111721076 to 111721125 49 - TSS region transcription start site region 82974
Tssr82975 8 111726106 to 111726139 33 - TSS region transcription start site region 82975
Cpgi21065 8 111731214 to 111732523 1309 CpG island CpG island 21065
Tssr82976 8 111732078 to 111732084 6 - TSS region transcription start site region 82976
Tssr82977 8 111732091 to 111732146 55 - TSS region transcription start site region 82977
Cpgi21066 8 111743155 to 111744495 1340 CpG island CpG island 21066
Tssr82978 8 111743799 to 111743857 58 - TSS region transcription start site region 82978
Tssr82979 8 111743868 to 111743887 19 - TSS region transcription start site region 82979
Gm39252 8 111748667 to 111754711 6044 - lncRNA gene predicted gene, 39252
Cpgi21067 8 111752253 to 111752468 215 CpG island CpG island 21067
Cfdp1 8 111768491 to 111854291 85800 - protein coding gene craniofacial development protein 1
Cpgi21068 8 111853722 to 111854519 797 CpG island CpG island 21068
Tssr82980 8 111854238 to 111854266 28 - TSS region transcription start site region 82980
Tssr82981 8 111854278 to 111854356 78 - TSS region transcription start site region 82981
Cpgi21069 8 111856152 to 111856360 208 CpG island CpG island 21069
Tmem170 8 111863038 to 111876750 13712 - protein coding gene transmembrane protein 170
Tssr82982 8 111864037 to 111864040 3 - TSS region transcription start site region 82982
Cpgi21070 8 111876254 to 111877040 786 CpG island CpG island 21070
Tssr82983 8 111876661 to 111876725 64 - TSS region transcription start site region 82983
Gm23853 8 111879304 to 111879407 103 + snRNA gene predicted gene, 23853
Chst5 8 111889135 to 111910199 21064 - protein coding gene carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5
Cpgi21071 8 111889813 to 111891003 1190 CpG island CpG island 21071