Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:111082548-111334202

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clec18a 8 111069496 to 111092424 22928 - protein coding gene C-type lectin domain family 18, member A
Cpgi21055 8 111093956 to 111095305 1349 CpG island CpG island 21055
Pdpr 8 111094630 to 111137074 42444 + protein coding gene pyruvate dehydrogenase phosphatase regulatory subunit
9430091E24Rik 8 111128886 to 111145480 16594 - lncRNA gene RIKEN cDNA 9430091E24 gene
Cpgi21056 8 111144896 to 111146118 1222 CpG island CpG island 21056
Glg1 8 111157548 to 111259202 101654 - protein coding gene golgi apparatus protein 1
Gm23193 8 111194964 to 111195045 81 + miRNA gene predicted gene, 23193
D8Mit316 8 111198869 to 111199016 147 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 316
D8Mit115 8 111238743 to 111238884 141 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 115
Tssr82910 8 111247287 to 111247291 4 - TSS region transcription start site region 82910
Tssr82911 8 111253877 to 111253908 31 - TSS region transcription start site region 82911
Tssr82912 8 111258135 to 111258141 6 - TSS region transcription start site region 82912
Cpgi21057 8 111258381 to 111259582 1201 CpG island CpG island 21057
Tssr82913 8 111259192 to 111259221 29 - TSS region transcription start site region 82913
Tssr79462 8 111259291 to 111259314 23 + TSS region transcription start site region 79462
Rfwd3 8 111270944 to 111300222 29278 - protein coding gene ring finger and WD repeat domain 3
Tssr82914 8 111281495 to 111281499 4 - TSS region transcription start site region 82914
8430437B07Rik 8 111286611 to 111287766 1155 unclassified gene RIKEN cDNA 8430437B07 gene
Cpgi21058 8 111299448 to 111300501 1053 CpG island CpG island 21058
Tssr82915 8 111300189 to 111300206 17 - TSS region transcription start site region 82915
Tssr82916 8 111300226 to 111300241 15 - TSS region transcription start site region 82916
Gm6014 8 111309675 to 111310962 1287 - pseudogene predicted gene 6014
Tssr82917 8 111310208 to 111310211 3 - TSS region transcription start site region 82917
Mlkl 8 111311797 to 111338177 26380 - protein coding gene mixed lineage kinase domain-like
Gm45712 8 111318037 to 111318430 393 + pseudogene predicted gene 45712
D8Ertd362e 8 111323922 to 111324141 219 DNA segment DNA segment, Chr 8, ERATO Doi 362, expressed
Tssr82918 8 111325724 to 111325738 14 - TSS region transcription start site region 82918
Tssr82919 8 111333560 to 111333571 11 - TSS region transcription start site region 82919