Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:110772838-111902900

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261 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tgl1 8 101759576 to 110923404 9163828 QTL triglyceride level 1
Il34 8 110741829 to 110805924 64095 - protein coding gene interleukin 34
Gm39250 8 110760395 to 110780955 20560 + lncRNA gene predicted gene, 39250
Tssr82881 8 110776446 to 110776448 2 - TSS region transcription start site region 82881
Tssr82882 8 110790380 to 110790390 10 - TSS region transcription start site region 82882
Tssr82883 8 110793561 to 110793584 23 - TSS region transcription start site region 82883
Tssr82884 8 110793585 to 110793597 12 - TSS region transcription start site region 82884
Tssr82885 8 110793607 to 110793614 7 - TSS region transcription start site region 82885
Tssr82886 8 110793631 to 110793641 10 - TSS region transcription start site region 82886
Tssr79437 8 110805432 to 110805452 20 + TSS region transcription start site region 79437
Gm15895 8 110805638 to 110807477 1839 + antisense lncRNA gene predicted gene 15895
Tssr82887 8 110805822 to 110805848 26 - TSS region transcription start site region 82887
Tssr82888 8 110805863 to 110805952 89 - TSS region transcription start site region 82888
Sf3b3 8 110810492 to 110846806 36314 - protein coding gene splicing factor 3b, subunit 3
Snord111 8 110838535 to 110838598 63 - snoRNA gene small nucleolar RNA, C/D box 111
Gm22193 8 110842383 to 110842458 75 - snoRNA gene predicted gene, 22193
Tssr82889 8 110845025 to 110845030 5 - TSS region transcription start site region 82889
Cpgi21042 8 110846348 to 110847331 983 CpG island CpG island 21042
Cog4 8 110846600 to 110882227 35627 + protein coding gene component of oligomeric golgi complex 4
Tssr82890 8 110846770 to 110846798 28 - TSS region transcription start site region 82890
Tssr79438 8 110847015 to 110847049 34 + TSS region transcription start site region 79438
Tssr79439 8 110847143 to 110847150 7 + TSS region transcription start site region 79439
Gm26816 8 110863229 to 110940314 77085 - lincRNA gene predicted gene, 26816
Fcsk 8 110882456 to 110902488 20032 - protein coding gene fucose kinase
Cpgi21043 8 110883781 to 110884091 310 CpG island CpG island 21043
Cpgi21044 8 110902191 to 110902565 374 CpG island CpG island 21044
Tssr82891 8 110902442 to 110902467 25 - TSS region transcription start site region 82891
Cpgi21045 8 110919380 to 110920903 1523 CpG island CpG island 21045
Tssr79440 8 110919826 to 110919856 30 + TSS region transcription start site region 79440
Tssr79441 8 110919874 to 110919902 28 + TSS region transcription start site region 79441
Tssr79442 8 110919916 to 110919994 78 + TSS region transcription start site region 79442
St3gal2 8 110919922 to 110972480 52558 + protein coding gene ST3 beta-galactoside alpha-2,3-sialyltransferase 2
Tssr79443 8 110923028 to 110923037 9 + TSS region transcription start site region 79443
Gm26132 8 110923116 to 110923263 147 + snoRNA gene predicted gene, 26132
D8Mit166 8 110923285 to 110923404 119 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 166
Gm46052 8 110936187 to 110939366 3179 - lncRNA gene predicted gene, 46052
Tssr79444 8 110940909 to 110940926 17 + TSS region transcription start site region 79444
Tssr79445 8 110940931 to 110940948 17 + TSS region transcription start site region 79445
Tssr79446 8 110940951 to 110940975 24 + TSS region transcription start site region 79446
Tssr79447 8 110940980 to 110940981 1 + TSS region transcription start site region 79447
Gm39251 8 110942300 to 110949609 7309 - lncRNA gene predicted gene, 39251
Tssr79448 8 110956335 to 110956360 25 + TSS region transcription start site region 79448
Cpgi21046 8 110957586 to 110957943 357 CpG island CpG island 21046
Tssr79449 8 110957727 to 110957753 26 + TSS region transcription start site region 79449
Tssr79450 8 110957761 to 110957774 13 + TSS region transcription start site region 79450
Tssr79451 8 110961168 to 110961171 3 + TSS region transcription start site region 79451
Cpgi21047 8 110962175 to 110962418 243 CpG island CpG island 21047
Tssr2687 8 110962848 to 110962851 3 + TSS region transcription start site region 2687
Cpgi21048 8 110969981 to 110970462 481 CpG island CpG island 21048
Ddx19a 8 110974996 to 110997800 22804 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a
Cpgi21049 8 110997465 to 110998057 592 CpG island CpG island 21049
Tssr82892 8 110997764 to 110997839 75 - TSS region transcription start site region 82892
Tssr79452 8 110997869 to 110997901 32 + TSS region transcription start site region 79452
Ddx19b 8 111003188 to 111031751 28563 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
Mir3473d 8 111016450 to 111016530 80 - miRNA gene microRNA 3473d
Cpgi21050 8 111027450 to 111028030 580 CpG island CpG island 21050
Tssr82893 8 111027670 to 111027721 51 - TSS region transcription start site region 82893
Tssr82894 8 111027724 to 111027745 21 - TSS region transcription start site region 82894
Tssr82895 8 111027752 to 111027791 39 - TSS region transcription start site region 82895
Tssr82896 8 111030915 to 111030918 3 - TSS region transcription start site region 82896
Cpgi21051 8 111031531 to 111031828 297 CpG island CpG island 21051
Tssr82897 8 111031712 to 111031747 35 - TSS region transcription start site region 82897
Aars 8 111033144 to 111057664 24520 + protein coding gene alanyl-tRNA synthetase
Cpgi21052 8 111033803 to 111034252 449 CpG island CpG island 21052
Tssr79453 8 111033861 to 111033886 25 + TSS region transcription start site region 79453
Tssr79454 8 111033890 to 111033932 42 + TSS region transcription start site region 79454
Tssr79455 8 111033937 to 111033949 12 + TSS region transcription start site region 79455
Tssr79456 8 111034098 to 111034165 67 + TSS region transcription start site region 79456
Tssr79457 8 111036885 to 111036899 14 + TSS region transcription start site region 79457
Tssr79458 8 111036902 to 111036912 10 + TSS region transcription start site region 79458
Gm24103 8 111041948 to 111042024 76 - miRNA gene predicted gene, 24103
Tssr79459 8 111043294 to 111043313 19 + TSS region transcription start site region 79459
Cpgi21053 8 111056091 to 111057404 1313 CpG island CpG island 21053
Tssr79460 8 111056319 to 111056384 65 + TSS region transcription start site region 79460
Exosc6 8 111056339 to 111057664 1325 + protein coding gene exosome component 6
Tssr79461 8 111056541 to 111056600 59 + TSS region transcription start site region 79461
Gm38523 8 111058697 to 111065159 6462 - protein coding gene predicted gene, 38523
Tssr82898 8 111061767 to 111061773 6 - TSS region transcription start site region 82898
Tssr82899 8 111061814 to 111061822 8 - TSS region transcription start site region 82899
Cpgi21054 8 111062393 to 111062561 168 CpG island CpG island 21054
n-TGgcc2 8 111062561 to 111062631 70 + tRNA gene nuclear encoded tRNA glycine 2 (anticodon GCC)
Clec18a 8 111069496 to 111092424 22928 - protein coding gene C-type lectin domain family 18, member A
Tssr82900 8 111081137 to 111081148 11 - TSS region transcription start site region 82900
Tssr82901 8 111081670 to 111081679 9 - TSS region transcription start site region 82901
Tssr82902 8 111081695 to 111081730 35 - TSS region transcription start site region 82902
Tssr82903 8 111081735 to 111081740 5 - TSS region transcription start site region 82903
Tssr82904 8 111081813 to 111081824 11 - TSS region transcription start site region 82904
Tssr82905 8 111081832 to 111081843 11 - TSS region transcription start site region 82905
Tssr82906 8 111081855 to 111081871 16 - TSS region transcription start site region 82906
Tssr82907 8 111081898 to 111081916 18 - TSS region transcription start site region 82907
Tssr82908 8 111082018 to 111082021 3 - TSS region transcription start site region 82908
Tssr82909 8 111082043 to 111082078 35 - TSS region transcription start site region 82909
Cpgi21055 8 111093956 to 111095305 1349 CpG island CpG island 21055
Pdpr 8 111094630 to 111137074 42444 + protein coding gene pyruvate dehydrogenase phosphatase regulatory subunit
9430091E24Rik 8 111128886 to 111145480 16594 - lncRNA gene RIKEN cDNA 9430091E24 gene
Cpgi21056 8 111144896 to 111146118 1222 CpG island CpG island 21056
Glg1 8 111157548 to 111259202 101654 - protein coding gene golgi apparatus protein 1
Gm23193 8 111194964 to 111195045 81 + miRNA gene predicted gene, 23193
D8Mit316 8 111198869 to 111199016 147 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 316
D8Mit115 8 111238743 to 111238884 141 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 115
Tssr82910 8 111247287 to 111247291 4 - TSS region transcription start site region 82910
Tssr82911 8 111253877 to 111253908 31 - TSS region transcription start site region 82911
Tssr82912 8 111258135 to 111258141 6 - TSS region transcription start site region 82912
Cpgi21057 8 111258381 to 111259582 1201 CpG island CpG island 21057
Tssr82913 8 111259192 to 111259221 29 - TSS region transcription start site region 82913
Tssr79462 8 111259291 to 111259314 23 + TSS region transcription start site region 79462
Rfwd3 8 111270944 to 111300222 29278 - protein coding gene ring finger and WD repeat domain 3
Tssr82914 8 111281495 to 111281499 4 - TSS region transcription start site region 82914
8430437B07Rik 8 111286611 to 111287766 1155 unclassified gene RIKEN cDNA 8430437B07 gene
Cpgi21058 8 111299448 to 111300501 1053 CpG island CpG island 21058
Tssr82915 8 111300189 to 111300206 17 - TSS region transcription start site region 82915
Tssr82916 8 111300226 to 111300241 15 - TSS region transcription start site region 82916
Gm6014 8 111309675 to 111310962 1287 - pseudogene predicted gene 6014
Tssr82917 8 111310208 to 111310211 3 - TSS region transcription start site region 82917
Mlkl 8 111311797 to 111338177 26380 - protein coding gene mixed lineage kinase domain-like
Gm45712 8 111318037 to 111318430 393 + pseudogene predicted gene 45712
D8Ertd362e 8 111323922 to 111324141 219 DNA segment DNA segment, Chr 8, ERATO Doi 362, expressed
Tssr82918 8 111325724 to 111325738 14 - TSS region transcription start site region 82918
Tssr82919 8 111333560 to 111333571 11 - TSS region transcription start site region 82919
Tssr82920 8 111337747 to 111337758 11 - TSS region transcription start site region 82920
Tssr82921 8 111337761 to 111337827 66 - TSS region transcription start site region 82921
Cpgi21059 8 111337787 to 111338290 503 CpG island CpG island 21059
Tssr79463 8 111337838 to 111337900 62 + TSS region transcription start site region 79463
Tssr82922 8 111337883 to 111337914 31 - TSS region transcription start site region 82922
Tssr82923 8 111338152 to 111338231 79 - TSS region transcription start site region 82923
Tssr82924 8 111338422 to 111338434 12 - TSS region transcription start site region 82924
Tssr82925 8 111338441 to 111338461 20 - TSS region transcription start site region 82925
Fa2h 8 111345138 to 111393821 48683 - protein coding gene fatty acid 2-hydroxylase
Tssr82926 8 111346378 to 111346408 30 - TSS region transcription start site region 82926
Tssr82927 8 111348070 to 111348081 11 - TSS region transcription start site region 82927
Tssr82928 8 111366475 to 111366503 28 - TSS region transcription start site region 82928
Cpgi21060 8 111393248 to 111394152 904 CpG island CpG island 21060
Tssr82929 8 111393786 to 111393799 13 - TSS region transcription start site region 82929
Tssr82930 8 111393810 to 111393834 24 - TSS region transcription start site region 82930
Tssr82931 8 111393838 to 111393851 13 - TSS region transcription start site region 82931
Tssr82932 8 111393862 to 111393873 11 - TSS region transcription start site region 82932
Gm24793 8 111418732 to 111418863 131 + snoRNA gene predicted gene, 24793
Tssr82933 8 111421675 to 111421682 7 - TSS region transcription start site region 82933
Tssr79464 8 111431267 to 111431278 11 + TSS region transcription start site region 79464
Tssr79465 8 111431385 to 111431392 7 + TSS region transcription start site region 79465
Tssr79466 8 111435825 to 111435847 22 + TSS region transcription start site region 79466
Wdr59 8 111448797 to 111522092 73295 - protein coding gene WD repeat domain 59
Mir1957b 8 111450200 to 111450322 122 + miRNA gene microRNA 1957b
Cpgi21061 8 111521861 to 111522382 521 CpG island CpG island 21061
Tssr82934 8 111522073 to 111522112 39 - TSS region transcription start site region 82934
Tssr79467 8 111522335 to 111522349 14 + TSS region transcription start site region 79467
Cpgi21062 8 111536096 to 111537793 1697 CpG island CpG island 21062
Tssr79468 8 111536157 to 111536186 29 + TSS region transcription start site region 79468
Tssr79469 8 111536266 to 111536301 35 + TSS region transcription start site region 79469
Tssr82935 8 111536402 to 111536439 37 - TSS region transcription start site region 82935
Tssr79470 8 111536492 to 111536553 61 + TSS region transcription start site region 79470
Tssr79471 8 111536624 to 111536633 9 + TSS region transcription start site region 79471
Znrf1 8 111536640 to 111626030 89390 + protein coding gene zinc and ring finger 1
Tssr79472 8 111536793 to 111536826 33 + TSS region transcription start site region 79472
Tssr79473 8 111536833 to 111536853 20 + TSS region transcription start site region 79473
Tssr79474 8 111537000 to 111537037 37 + TSS region transcription start site region 79474
Tssr82936 8 111537379 to 111537390 11 - TSS region transcription start site region 82936
Tssr82937 8 111537417 to 111537427 10 - TSS region transcription start site region 82937
Tssr2688 8 111537546 to 111537572 26 + TSS region transcription start site region 2688
Tssr82938 8 111537561 to 111537570 9 - TSS region transcription start site region 82938
Tssr79475 8 111540227 to 111540230 3 + TSS region transcription start site region 79475
Tssr79476 8 111543007 to 111543030 23 + TSS region transcription start site region 79476
Tssr79477 8 111550345 to 111550352 7 + TSS region transcription start site region 79477
Tssr79478 8 111553100 to 111553107 7 + TSS region transcription start site region 79478
Tssr79479 8 111556394 to 111556398 4 + TSS region transcription start site region 79479
Tssr79480 8 111556548 to 111556559 11 + TSS region transcription start site region 79480
Tssr79481 8 111556611 to 111556622 11 + TSS region transcription start site region 79481
Tssr79482 8 111556628 to 111556641 13 + TSS region transcription start site region 79482
Tssr79483 8 111560938 to 111560946 8 + TSS region transcription start site region 79483
Tssr2689 8 111561157 to 111561192 35 + TSS region transcription start site region 2689
Tssr82939 8 111562053 to 111562059 6 - TSS region transcription start site region 82939
Tssr79484 8 111562448 to 111562453 5 + TSS region transcription start site region 79484
Tssr82940 8 111562524 to 111562552 28 - TSS region transcription start site region 82940
Tssr79485 8 111562683 to 111562732 49 + TSS region transcription start site region 79485
Tssr79486 8 111564031 to 111564043 12 + TSS region transcription start site region 79486
Tssr79487 8 111582647 to 111582652 5 + TSS region transcription start site region 79487
Tssr2690 8 111596094 to 111596107 13 + TSS region transcription start site region 2690
Tssr82941 8 111599914 to 111599921 7 - TSS region transcription start site region 82941
Tssr79488 8 111621686 to 111621692 6 + TSS region transcription start site region 79488
Ldhd 8 111626271 to 111630322 4051 - protein coding gene lactate dehydrogenase D
Tssr82942 8 111629156 to 111629169 13 - TSS region transcription start site region 82942
Tssr79489 8 111629848 to 111629852 4 + TSS region transcription start site region 79489
Tssr82943 8 111630325 to 111630344 19 - TSS region transcription start site region 82943
Cpgi21063 8 111643342 to 111644035 693 CpG island CpG island 21063
Zfp1 8 111643401 to 111671011 27610 + protein coding gene zinc finger protein 1
Tssr79490 8 111643425 to 111643450 25 + TSS region transcription start site region 79490
Tssr79491 8 111643456 to 111643490 34 + TSS region transcription start site region 79491
Tssr79492 8 111643493 to 111643540 47 + TSS region transcription start site region 79492
Tssr82944 8 111643877 to 111643897 20 - TSS region transcription start site region 82944
Tssr82945 8 111644297 to 111644325 28 - TSS region transcription start site region 82945
Tssr79493 8 111651579 to 111651598 19 + TSS region transcription start site region 79493
Tssr79494 8 111686513 to 111686526 13 + TSS region transcription start site region 79494
Ctrb1 8 111686519 to 111691010 4491 - protein coding gene chymotrypsinogen B1
Tssr82946 8 111686541 to 111686602 61 - TSS region transcription start site region 82946
Tssr79495 8 111686552 to 111686634 82 + TSS region transcription start site region 79495
Tssr82947 8 111686605 to 111686612 7 - TSS region transcription start site region 82947
Tssr82948 8 111686616 to 111686621 5 - TSS region transcription start site region 82948
Tssr82949 8 111686625 to 111686679 54 - TSS region transcription start site region 82949
Tssr79496 8 111686644 to 111686661 17 + TSS region transcription start site region 79496
Tssr79497 8 111686663 to 111686666 3 + TSS region transcription start site region 79497