Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:110727383-110957458

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tgl1 8 101759576 to 110923404 9163828 QTL triglyceride level 1
Mtss2 8 110721476 to 110741400 19924 + protein coding gene MTSS I-BAR domain containing 2
Cpgi21039 8 110727005 to 110727583 578 CpG island CpG island 21039
Tssr79429 8 110728832 to 110728854 22 + TSS region transcription start site region 79429
Tssr79430 8 110730055 to 110730076 21 + TSS region transcription start site region 79430
Tssr79431 8 110732121 to 110732134 13 + TSS region transcription start site region 79431
Tssr79432 8 110737933 to 110737948 15 + TSS region transcription start site region 79432
Cpgi21040 8 110738328 to 110739303 975 CpG island CpG island 21040
Tssr2686 8 110738559 to 110738577 18 + TSS region transcription start site region 2686
Tssr79433 8 110740925 to 110740933 8 + TSS region transcription start site region 79433
Tssr79434 8 110741057 to 110741071 14 + TSS region transcription start site region 79434
Tssr79435 8 110741186 to 110741205 19 + TSS region transcription start site region 79435
Il34 8 110741829 to 110805924 64095 - protein coding gene interleukin 34
Cpgi21041 8 110748175 to 110748449 274 CpG island CpG island 21041
Tssr79436 8 110754989 to 110755004 15 + TSS region transcription start site region 79436
Tssr82879 8 110755583 to 110755595 12 - TSS region transcription start site region 82879
Tssr82880 8 110755606 to 110755664 58 - TSS region transcription start site region 82880
Gm15894 8 110755841 to 110758972 3131 + antisense lncRNA gene predicted gene 15894
Gm39250 8 110760395 to 110780955 20560 + lncRNA gene predicted gene, 39250
Tssr82881 8 110776446 to 110776448 2 - TSS region transcription start site region 82881
Tssr82882 8 110790380 to 110790390 10 - TSS region transcription start site region 82882
Tssr82883 8 110793561 to 110793584 23 - TSS region transcription start site region 82883
Tssr82884 8 110793585 to 110793597 12 - TSS region transcription start site region 82884
Tssr82885 8 110793607 to 110793614 7 - TSS region transcription start site region 82885
Tssr82886 8 110793631 to 110793641 10 - TSS region transcription start site region 82886
Tssr79437 8 110805432 to 110805452 20 + TSS region transcription start site region 79437
Gm15895 8 110805638 to 110807477 1839 + antisense lncRNA gene predicted gene 15895
Tssr82887 8 110805822 to 110805848 26 - TSS region transcription start site region 82887
Tssr82888 8 110805863 to 110805952 89 - TSS region transcription start site region 82888
Sf3b3 8 110810492 to 110846806 36314 - protein coding gene splicing factor 3b, subunit 3
Snord111 8 110838535 to 110838598 63 - snoRNA gene small nucleolar RNA, C/D box 111
Gm22193 8 110842383 to 110842458 75 - snoRNA gene predicted gene, 22193
Tssr82889 8 110845025 to 110845030 5 - TSS region transcription start site region 82889
Cpgi21042 8 110846348 to 110847331 983 CpG island CpG island 21042
Cog4 8 110846600 to 110882227 35627 + protein coding gene component of oligomeric golgi complex 4
Tssr82890 8 110846770 to 110846798 28 - TSS region transcription start site region 82890
Tssr79438 8 110847015 to 110847049 34 + TSS region transcription start site region 79438
Tssr79439 8 110847143 to 110847150 7 + TSS region transcription start site region 79439
Gm26816 8 110863229 to 110940314 77085 - lincRNA gene predicted gene, 26816
Fcsk 8 110882456 to 110902488 20032 - protein coding gene fucose kinase
Cpgi21043 8 110883781 to 110884091 310 CpG island CpG island 21043
Cpgi21044 8 110902191 to 110902565 374 CpG island CpG island 21044
Tssr82891 8 110902442 to 110902467 25 - TSS region transcription start site region 82891
Cpgi21045 8 110919380 to 110920903 1523 CpG island CpG island 21045
Tssr79440 8 110919826 to 110919856 30 + TSS region transcription start site region 79440
Tssr79441 8 110919874 to 110919902 28 + TSS region transcription start site region 79441
Tssr79442 8 110919916 to 110919994 78 + TSS region transcription start site region 79442
St3gal2 8 110919922 to 110972480 52558 + protein coding gene ST3 beta-galactoside alpha-2,3-sialyltransferase 2
Tssr79443 8 110923028 to 110923037 9 + TSS region transcription start site region 79443
Gm26132 8 110923116 to 110923263 147 + snoRNA gene predicted gene, 26132
D8Mit166 8 110923285 to 110923404 119 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 166
Gm46052 8 110936187 to 110939366 3179 - lncRNA gene predicted gene, 46052
Tssr79444 8 110940909 to 110940926 17 + TSS region transcription start site region 79444
Tssr79445 8 110940931 to 110940948 17 + TSS region transcription start site region 79445
Tssr79446 8 110940951 to 110940975 24 + TSS region transcription start site region 79446
Tssr79447 8 110940980 to 110940981 1 + TSS region transcription start site region 79447
Gm39251 8 110942300 to 110949609 7309 - lncRNA gene predicted gene, 39251
Tssr79448 8 110956335 to 110956360 25 + TSS region transcription start site region 79448