Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:110521246-110741316

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hydin 8 110266977 to 110610253 343276 + protein coding gene HYDIN, axonemal central pair apparatus protein
Tssr82876 8 110521936 to 110521952 16 - TSS region transcription start site region 82876
Tssr82877 8 110522131 to 110522158 27 - TSS region transcription start site region 82877
Tssr82878 8 110522170 to 110522188 18 - TSS region transcription start site region 82878
Tssr79417 8 110522384 to 110522387 3 + TSS region transcription start site region 79417
Gm44489 8 110556766 to 110556862 96 - miRNA gene predicted gene, 44489
D8Mit213 8 110565339 to 110565515 176 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 213
D8Mit151 8 110591723 to 110591965 242 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 151
Cpgi21037 8 110618381 to 110619264 883 CpG island CpG island 21037
Tssr79418 8 110618577 to 110618619 42 + TSS region transcription start site region 79418
Vac14 8 110618585 to 110720398 101813 + protein coding gene Vac14 homolog (S. cerevisiae)
Tssr79419 8 110618673 to 110618693 20 + TSS region transcription start site region 79419
n-TGgcc11 8 110630553 to 110630623 70 - tRNA gene nuclear encoded tRNA glycine 11 (anticodon GCC)
n-TGgcc10 8 110631246 to 110631316 70 - tRNA gene nuclear encoded tRNA glycine 10 (anticodon GCC)
Tssr79420 8 110703236 to 110703243 7 + TSS region transcription start site region 79420
Tssr79421 8 110703721 to 110703734 13 + TSS region transcription start site region 79421
Tssr79422 8 110715118 to 110715129 11 + TSS region transcription start site region 79422
Cpgi21038 8 110720646 to 110722535 1889 CpG island CpG island 21038
Tssr79423 8 110721422 to 110721444 22 + TSS region transcription start site region 79423
Tssr79424 8 110721451 to 110721456 5 + TSS region transcription start site region 79424
Tssr79425 8 110721462 to 110721486 24 + TSS region transcription start site region 79425
Mtss2 8 110721476 to 110741400 19924 + protein coding gene MTSS I-BAR domain containing 2
Tssr79426 8 110721496 to 110721504 8 + TSS region transcription start site region 79426
Tssr79427 8 110721655 to 110721724 69 + TSS region transcription start site region 79427
Cpgi21039 8 110727005 to 110727583 578 CpG island CpG island 21039
Tssr79428 8 110727110 to 110727131 21 + TSS region transcription start site region 79428
Tssr79429 8 110728832 to 110728854 22 + TSS region transcription start site region 79429
Tssr79430 8 110730055 to 110730076 21 + TSS region transcription start site region 79430
Tssr79431 8 110732121 to 110732134 13 + TSS region transcription start site region 79431
Tssr79432 8 110737933 to 110737948 15 + TSS region transcription start site region 79432
Cpgi21040 8 110738328 to 110739303 975 CpG island CpG island 21040
Tssr2686 8 110738559 to 110738577 18 + TSS region transcription start site region 2686
Tssr79433 8 110740925 to 110740933 8 + TSS region transcription start site region 79433
Tssr79434 8 110741057 to 110741071 14 + TSS region transcription start site region 79434
Tssr79435 8 110741186 to 110741205 19 + TSS region transcription start site region 79435