Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:110246977-110630253

31 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm39249	8	110255042 to 110260549	5507	-	lncRNA gene	predicted gene, 39249
Gm26832	8	110265248 to 110267462	2214	-	antisense lncRNA gene	predicted gene, 26832
Tssr79414	8	110266950 to 110266955	5	+	TSS region	transcription start site region 79414
Tssr79415	8	110266960 to 110266982	22	+	TSS region	transcription start site region 79415
Hydin	8	110266977 to 110610253	343276	+	protein coding gene	HYDIN, axonemal central pair apparatus protein
Cpgi21035	8	110290786 to 110291226	440		CpG island	CpG island 21035
Cpgi21036	8	110365452 to 110365676	224		CpG island	CpG island 21036
Gm23627	8	110421361 to 110421467	106	-	snRNA gene	predicted gene, 23627
Gm35676	8	110436824 to 110444585	7761	-	lncRNA gene	predicted gene, 35676
Tpnr6	8	110440000 to 114230000	3790000		QTL	thermal pain response 6
Tssr82871	8	110444381 to 110444397	16	-	TSS region	transcription start site region 82871
Tssr79416	8	110444470 to 110444501	31	+	TSS region	transcription start site region 79416
Tssr82872	8	110489814 to 110489817	3	-	TSS region	transcription start site region 82872
Gm21283	8	110495366 to 110502356	6990	-	lncRNA gene	predicted gene, 21283
Gm22701	8	110498852 to 110499142	290	+	unclassified non-coding RNA gene	predicted gene, 22701
Gm47306	8	110498985 to 110499044	59	+	miRNA gene	predicted gene, 47306
Tssr82873	8	110502348 to 110502361	13	-	TSS region	transcription start site region 82873
Tssr82874	8	110503048 to 110503067	19	-	TSS region	transcription start site region 82874
Tssr82875	8	110503072 to 110503080	8	-	TSS region	transcription start site region 82875
D8Dcr40	8	110518690 to 110518791	101		DNA segment	DNA Segment, Chr 8, Derry C. Roopenian 40
Tssr82876	8	110521936 to 110521952	16	-	TSS region	transcription start site region 82876
Tssr82877	8	110522131 to 110522158	27	-	TSS region	transcription start site region 82877
Tssr82878	8	110522170 to 110522188	18	-	TSS region	transcription start site region 82878
Tssr79417	8	110522384 to 110522387	3	+	TSS region	transcription start site region 79417
Gm44489	8	110556766 to 110556862	96	-	miRNA gene	predicted gene, 44489
D8Mit213	8	110565339 to 110565515	176		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 213
D8Mit151	8	110591723 to 110591965	242		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 151
Cpgi21037	8	110618381 to 110619264	883		CpG island	CpG island 21037
Tssr79418	8	110618577 to 110618619	42	+	TSS region	transcription start site region 79418
Vac14	8	110618585 to 110720398	101813	+	protein coding gene	Vac14 homolog (S. cerevisiae)
Tssr79419	8	110618673 to 110618693	20	+	TSS region	transcription start site region 79419