Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:11016555-11217373

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
9530052E02Rik	8	11007850 to 11054541	46691	+	lncRNA gene	RIKEN cDNA 9530052E02 gene
Tssr76188	8	11036227 to 11036239	12	+	TSS region	transcription start site region 76188
B830042I05Rik	8	11071046 to 11076881	5835	+	lincRNA gene	RIKEN cDNA B830042I05 gene
Tssr76189	8	11071465 to 11071479	14	+	TSS region	transcription start site region 76189
Tssr76190	8	11098965 to 11098983	18	+	TSS region	transcription start site region 76190
Gm44714	8	11116555 to 11117373	818	+	lincRNA gene	predicted gene 44714
Gm44717	8	11135641 to 11149246	13605	-	lincRNA gene	predicted gene 44717
Tssr76191	8	11175221 to 11175225	4	+	TSS region	transcription start site region 76191
Tssr80364	8	11183699 to 11183703	4	-	TSS region	transcription start site region 80364
Cpgi20081	8	11187661 to 11188458	797		CpG island	CpG island 20081
Gm15418	8	11187755 to 11204503	16748	+	antisense lncRNA gene	predicted gene 15418
Col4a1	8	11198423 to 11312826	114403	-	protein coding gene	collagen, type IV, alpha 1
D0Nds29	8	11199100 to 11199218	118		DNA segment	DNA segment, Nuffield Department of Surgery 29
Tssr80365	8	11199340 to 11199353	13	-	TSS region	transcription start site region 80365
Tssr80366	8	11199735 to 11199776	41	-	TSS region	transcription start site region 80366
Tssr80367	8	11201784 to 11201806	22	-	TSS region	transcription start site region 80367
Tssr80368	8	11202991 to 11203009	18	-	TSS region	transcription start site region 80368
Tssr80369	8	11211573 to 11211577	4	-	TSS region	transcription start site region 80369