Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:10936465-11206479

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D8Mit286 8 10939167 to 10939280 113 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 286
Gm44955 8 10943326 to 10947890 4564 - lincRNA gene predicted gene 44955
Cpgi20077 8 10946190 to 10946379 189 CpG island CpG island 20077
Tssr80352 8 10947806 to 10947820 14 - TSS region transcription start site region 80352
Tssr80353 8 10947821 to 10947845 24 - TSS region transcription start site region 80353
Tssr80354 8 10947853 to 10947862 9 - TSS region transcription start site region 80354
Gm44956 8 10962957 to 10970814 7857 - lincRNA gene predicted gene 44956
Cpgi20078 8 10978500 to 10978819 319 CpG island CpG island 20078
Irs2 8 10986961 to 11008430 21469 - protein coding gene insulin receptor substrate 2
Cpgi20079 8 11004495 to 11004761 266 CpG island CpG island 20079
Tssr80355 8 11006242 to 11006246 4 - TSS region transcription start site region 80355
Cpgi20080 8 11006577 to 11010093 3516 CpG island CpG island 20080
Tssr80356 8 11006711 to 11006725 14 - TSS region transcription start site region 80356
Tssr76186 8 11007429 to 11007466 37 + TSS region transcription start site region 76186
9530052E02Rik 8 11007850 to 11054541 46691 + lncRNA gene RIKEN cDNA 9530052E02 gene
Tssr80357 8 11007951 to 11007979 28 - TSS region transcription start site region 80357
Tssr80358 8 11008230 to 11008243 13 - TSS region transcription start site region 80358
Tssr80359 8 11008894 to 11008905 11 - TSS region transcription start site region 80359
Tssr80360 8 11008913 to 11008936 23 - TSS region transcription start site region 80360
Tssr80361 8 11008941 to 11008973 32 - TSS region transcription start site region 80361
Tssr76187 8 11009177 to 11009197 20 + TSS region transcription start site region 76187
Tssr80362 8 11009461 to 11009499 38 - TSS region transcription start site region 80362
Tssr80363 8 11016290 to 11016301 11 - TSS region transcription start site region 80363
Tssr76188 8 11036227 to 11036239 12 + TSS region transcription start site region 76188
B830042I05Rik 8 11071046 to 11076881 5835 + lincRNA gene RIKEN cDNA B830042I05 gene
Tssr76189 8 11071465 to 11071479 14 + TSS region transcription start site region 76189
Tssr76190 8 11098965 to 11098983 18 + TSS region transcription start site region 76190
Gm44714 8 11116555 to 11117373 818 + lincRNA gene predicted gene 44714
Gm44717 8 11135641 to 11149246 13605 - lincRNA gene predicted gene 44717
Tssr76191 8 11175221 to 11175225 4 + TSS region transcription start site region 76191
Tssr80364 8 11183699 to 11183703 4 - TSS region transcription start site region 80364
Cpgi20081 8 11187661 to 11188458 797 CpG island CpG island 20081
Gm15418 8 11187755 to 11204503 16748 + antisense lncRNA gene predicted gene 15418
Col4a1 8 11198423 to 11312826 114403 - protein coding gene collagen, type IV, alpha 1
D0Nds29 8 11199100 to 11199218 118 DNA segment DNA segment, Nuffield Department of Surgery 29
Tssr80365 8 11199340 to 11199353 13 - TSS region transcription start site region 80365
Tssr80366 8 11199735 to 11199776 41 - TSS region transcription start site region 80366
Tssr80367 8 11201784 to 11201806 22 - TSS region transcription start site region 80367
Tssr80368 8 11202991 to 11203009 18 - TSS region transcription start site region 80368