Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:108512213-108712231

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42041 8 108512291 to 108524195 11904 - lncRNA gene predicted gene, 42041
Gm39244 8 108526937 to 108537221 10284 - lincRNA gene predicted gene, 39244
Cpgi20999 8 108537697 to 108538018 321 CpG island CpG island 20999
Tssr82811 8 108537844 to 108537861 17 - TSS region transcription start site region 82811
Lncbate1 8 108553252 to 108584595 31343 - lincRNA gene brown adipose tissue enriched long non-coding RNA 1
Cpgi21000 8 108566059 to 108566256 197 CpG island CpG island 21000
Tssr82812 8 108584327 to 108584337 10 - TSS region transcription start site region 82812
Tssr82813 8 108584353 to 108584360 7 - TSS region transcription start site region 82813
Tssr82814 8 108584467 to 108584477 10 - TSS region transcription start site region 82814
Tssr82815 8 108584540 to 108584556 16 - TSS region transcription start site region 82815
Tssr82816 8 108584559 to 108584576 17 - TSS region transcription start site region 82816
Tssr82817 8 108584647 to 108584658 11 - TSS region transcription start site region 82817
Tssr82818 8 108584722 to 108584732 10 - TSS region transcription start site region 82818
Tssr79322 8 108585047 to 108585051 4 + TSS region transcription start site region 79322
Tssr79323 8 108612213 to 108612231 18 + TSS region transcription start site region 79323
Tssr79324 8 108612258 to 108612278 20 + TSS region transcription start site region 79324
D8Mit34 8 108627449 to 108627554 105 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 34
Gm42042 8 108637580 to 108677384 39804 + lncRNA gene predicted gene, 42042
Tssr79325 8 108638032 to 108638037 5 + TSS region transcription start site region 79325
Gm42043 8 108677589 to 108695612 18023 - lncRNA gene predicted gene, 42043
Cpgi21001 8 108695388 to 108696732 1344 CpG island CpG island 21001
Tssr79326 8 108703454 to 108703501 47 + TSS region transcription start site region 79326
Tssr79327 8 108703555 to 108703564 9 + TSS region transcription start site region 79327
Tssr79328 8 108703593 to 108703617 24 + TSS region transcription start site region 79328
Cpgi21002 8 108703602 to 108705321 1719 CpG island CpG island 21002
Tssr79329 8 108703618 to 108703650 32 + TSS region transcription start site region 79329
Tssr79330 8 108703670 to 108703710 40 + TSS region transcription start site region 79330
Tssr79331 8 108703741 to 108703772 31 + TSS region transcription start site region 79331
Tssr79332 8 108703838 to 108703893 55 + TSS region transcription start site region 79332
Tssr79333 8 108703943 to 108703956 13 + TSS region transcription start site region 79333
Tssr79334 8 108704074 to 108704107 33 + TSS region transcription start site region 79334
Zfhx3 8 108704177 to 108961636 257459 + protein coding gene zinc finger homeobox 3
Tssr79335 8 108704261 to 108704283 22 + TSS region transcription start site region 79335