Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:107725829-108616023

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42040 8 107779197 to 107823290 44093 + lncRNA gene predicted gene, 42040
Gm39242 8 107800429 to 107834337 33908 - lncRNA gene predicted gene, 39242
Cpgi20994 8 107824631 to 107824829 198 CpG island CpG island 20994
Gm23646 8 107840957 to 107841057 100 + miRNA gene predicted gene, 23646
Gm22825 8 107842451 to 107842551 100 + miRNA gene predicted gene, 22825
Tssr2683 8 107846842 to 107846850 8 + TSS region transcription start site region 2683
5033426E14Rik 8 107869685 to 107885011 15326 + lincRNA gene RIKEN cDNA 5033426E14 gene
Tssr82810 8 107966916 to 107966919 3 - TSS region transcription start site region 82810
Cpgi20995 8 108027613 to 108027938 325 CpG island CpG island 20995
D8Mit313 8 108031552 to 108031676 124 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 313
Cpgi20996 8 108170829 to 108171023 194 CpG island CpG island 20996
Cpgi20997 8 108175270 to 108175432 162 CpG island CpG island 20997
D8Mit1007 8 108191196 to 108191318 122 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 1007
Gm34675 8 108305826 to 108310983 5157 - lncRNA gene predicted gene, 34675
Gm39243 8 108452224 to 108472312 20088 - lncRNA gene predicted gene, 39243
Cpgi20998 8 108483987 to 108484268 281 CpG island CpG island 20998
Gm42041 8 108512291 to 108524195 11904 - lncRNA gene predicted gene, 42041
Gm39244 8 108526937 to 108537221 10284 - lincRNA gene predicted gene, 39244
Cpgi20999 8 108537697 to 108538018 321 CpG island CpG island 20999
Tssr82811 8 108537844 to 108537861 17 - TSS region transcription start site region 82811
Lncbate1 8 108553252 to 108584595 31343 - lincRNA gene brown adipose tissue enriched long non-coding RNA 1
Cpgi21000 8 108566059 to 108566256 197 CpG island CpG island 21000
Tssr82812 8 108584327 to 108584337 10 - TSS region transcription start site region 82812
Tssr82813 8 108584353 to 108584360 7 - TSS region transcription start site region 82813
Tssr82814 8 108584467 to 108584477 10 - TSS region transcription start site region 82814
Tssr82815 8 108584540 to 108584556 16 - TSS region transcription start site region 82815
Tssr82816 8 108584559 to 108584576 17 - TSS region transcription start site region 82816
Tssr82817 8 108584647 to 108584658 11 - TSS region transcription start site region 82817
Tssr82818 8 108584722 to 108584732 10 - TSS region transcription start site region 82818
Tssr79322 8 108585047 to 108585051 4 + TSS region transcription start site region 79322
Tssr79323 8 108612213 to 108612231 18 + TSS region transcription start site region 79323
Tssr79324 8 108612258 to 108612278 20 + TSS region transcription start site region 79324