Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:107372796-107542805

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nfat5 8 107293470 to 107379517 86047 + protein coding gene nuclear factor of activated T cells 5
Tssr2682 8 107373217 to 107373231 14 + TSS region transcription start site region 2682
Tssr79308 8 107374318 to 107374354 36 + TSS region transcription start site region 79308
Nqo1 8 107388225 to 107403205 14980 - protein coding gene NAD(P)H dehydrogenase, quinone 1
Tssr82794 8 107388682 to 107388685 3 - TSS region transcription start site region 82794
Tssr82795 8 107389083 to 107389097 14 - TSS region transcription start site region 82795
Tssr82796 8 107393129 to 107393162 33 - TSS region transcription start site region 82796
Tssr82797 8 107403197 to 107403213 16 - TSS region transcription start site region 82797
Tssr79309 8 107408584 to 107408589 5 + TSS region transcription start site region 79309
Nob1 8 107412489 to 107425038 12549 - protein coding gene NIN1/RPN12 binding protein 1 homolog
Tssr82798 8 107421551 to 107421558 7 - TSS region transcription start site region 82798
Cpgi20990 8 107424529 to 107425254 725 CpG island CpG island 20990
Tssr82799 8 107425029 to 107425056 27 - TSS region transcription start site region 82799
Cpgi20991 8 107436027 to 107437026 999 CpG island CpG island 20991
Tssr79310 8 107436355 to 107436421 66 + TSS region transcription start site region 79310
Wwp2 8 107436365 to 107558595 122230 + protein coding gene WW domain containing E3 ubiquitin protein ligase 2
A430107J10Rik 8 107436833 to 107438477 1644 unclassified gene RIKEN cDNA A430107J10 gene
Rps26-ps1 8 107439150 to 107439585 435 - pseudogene ribosomal protein S26, pseudogene 1
Tssr82800 8 107439585 to 107439593 8 - TSS region transcription start site region 82800
Gm45900 8 107444284 to 107444692 408 - pseudogene predicted gene 45900
Gm39241 8 107446962 to 107450204 3242 - lncRNA gene predicted gene, 39241
Tssr79311 8 107454134 to 107454160 26 + TSS region transcription start site region 79311
E430022E14Rik 8 107455455 to 107457324 1869 unclassified gene RIKEN cDNA E430022E14 gene
Tssr79312 8 107457777 to 107457790 13 + TSS region transcription start site region 79312
Tssr79313 8 107457796 to 107457805 9 + TSS region transcription start site region 79313
Tssr79314 8 107502562 to 107502597 35 + TSS region transcription start site region 79314
Tssr79315 8 107503182 to 107503202 20 + TSS region transcription start site region 79315
Tssr82801 8 107505711 to 107505725 14 - TSS region transcription start site region 82801
Tssr79316 8 107506257 to 107506264 7 + TSS region transcription start site region 79316