Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:106894832-107056149

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Utp4 8 106893636 to 106923088 29452 + protein coding gene UTP4 small subunit processome component
Tssr79271 8 106917620 to 106917640 20 + TSS region transcription start site region 79271
Rpl10-ps2 8 106927769 to 106928413 644 - pseudogene ribosomal protein L10, pseudogene 2
Tssr82777 8 106928445 to 106928456 11 - TSS region transcription start site region 82777
9530067L11Rik 8 106933984 to 106935037 1053 unclassified gene RIKEN cDNA 9530067L11 gene
Cpgi20982 8 106935401 to 106936788 1387 CpG island CpG island 20982
Tssr82778 8 106935574 to 106935604 30 - TSS region transcription start site region 82778
Tssr79272 8 106935720 to 106935776 56 + TSS region transcription start site region 79272
Sntb2 8 106935750 to 107014192 78442 + protein coding gene syntrophin, basic 2
2900057C01Rik 8 106974832 to 106976149 1317 unclassified gene RIKEN cDNA 2900057C01 gene
D8Ertd323e 8 107000971 to 107001219 248 DNA segment DNA segment, Chr 8, ERATO Doi 323, expressed
Gm22085 8 107009502 to 107009611 109 - snRNA gene predicted gene, 22085
Tssr79273 8 107013927 to 107013973 46 + TSS region transcription start site region 79273
Tssr79274 8 107019391 to 107019398 7 + TSS region transcription start site region 79274
Gm16208 8 107029675 to 107031188 1513 - antisense lncRNA gene predicted gene 16208
Cpgi20983 8 107030957 to 107032079 1122 CpG island CpG island 20983
Tssr79275 8 107031031 to 107031035 4 + TSS region transcription start site region 79275
Tssr79276 8 107031114 to 107031126 12 + TSS region transcription start site region 79276
Tssr79277 8 107031138 to 107031149 11 + TSS region transcription start site region 79277
Tssr79278 8 107031218 to 107031229 11 + TSS region transcription start site region 79278
Tssr79279 8 107031235 to 107031246 11 + TSS region transcription start site region 79279
Tssr2680 8 107031273 to 107031291 18 + TSS region transcription start site region 2680
Tssr79280 8 107031295 to 107031350 55 + TSS region transcription start site region 79280
Vps4a 8 107031326 to 107045756 14430 + protein coding gene vacuolar protein sorting 4A
Tssr79281 8 107031354 to 107031365 11 + TSS region transcription start site region 79281
Gm16209 8 107037480 to 107038106 626 - pseudogene predicted gene 16209
Pdf 8 107046289 to 107048614 2325 - protein coding gene peptide deformylase (mitochondrial)
Cpgi20984 8 107047847 to 107049096 1249 CpG island CpG island 20984
Tssr82779 8 107048160 to 107048172 12 - TSS region transcription start site region 82779
Tssr82780 8 107048198 to 107048209 11 - TSS region transcription start site region 82780
Tssr79282 8 107048211 to 107048285 74 + TSS region transcription start site region 79282
Gm10627 8 107048243 to 107050562 2319 unclassified gene predicted gene 10627
Tssr82781 8 107048573 to 107048631 58 - TSS region transcription start site region 82781
Cog8 8 107048709 to 107056737 8028 - protein coding gene component of oligomeric golgi complex 8
Cpgi20985 8 107055948 to 107057582 1634 CpG island CpG island 20985