Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:106773581-107013609

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tango6 8 106683068 to 106851439 168371 + protein coding gene transport and golgi organization 6
D8Mit12 8 106785563 to 106785681 118 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 12
Gm34197 8 106825491 to 106846971 21480 - lncRNA gene predicted gene, 34197
D8Mit47 8 106844169 to 106844366 197 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 47
Has3 8 106870242 to 106882902 12660 + protein coding gene hyaluronan synthase 3
Cpgi20979 8 106870361 to 106871558 1197 CpG island CpG island 20979
Tssr79269 8 106870827 to 106870840 13 + TSS region transcription start site region 79269
Cpgi20980 8 106871930 to 106872258 328 CpG island CpG island 20980
Chtf8 8 106883863 to 106893601 9738 - protein coding gene CTF8, chromosome transmission fidelity factor 8
Tssr82773 8 106886330 to 106886359 29 - TSS region transcription start site region 82773
Tssr82774 8 106886394 to 106886409 15 - TSS region transcription start site region 82774
Cpgi20981 8 106892979 to 106894084 1105 CpG island CpG island 20981
Tssr82775 8 106893534 to 106893545 11 - TSS region transcription start site region 82775
Tssr82776 8 106893581 to 106893609 28 - TSS region transcription start site region 82776
Tssr79270 8 106893616 to 106893696 80 + TSS region transcription start site region 79270
Utp4 8 106893636 to 106923088 29452 + protein coding gene UTP4 small subunit processome component
Tssr79271 8 106917620 to 106917640 20 + TSS region transcription start site region 79271
Rpl10-ps2 8 106927769 to 106928413 644 - pseudogene ribosomal protein L10, pseudogene 2
Tssr82777 8 106928445 to 106928456 11 - TSS region transcription start site region 82777
9530067L11Rik 8 106933984 to 106935037 1053 unclassified gene RIKEN cDNA 9530067L11 gene
Cpgi20982 8 106935401 to 106936788 1387 CpG island CpG island 20982
Tssr82778 8 106935574 to 106935604 30 - TSS region transcription start site region 82778
Tssr79272 8 106935720 to 106935776 56 + TSS region transcription start site region 79272
Sntb2 8 106935750 to 107014192 78442 + protein coding gene syntrophin, basic 2
2900057C01Rik 8 106974832 to 106976149 1317 unclassified gene RIKEN cDNA 2900057C01 gene
D8Ertd323e 8 107000971 to 107001219 248 DNA segment DNA segment, Chr 8, ERATO Doi 323, expressed
Gm22085 8 107009502 to 107009611 109 - snRNA gene predicted gene, 22085