Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:106440997-106671001

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
6030452D12Rik 8 106500522 to 106507342 6820 + unclassified gene RIKEN cDNA 6030452D12 gene
Tssr79249 8 106504075 to 106504078 3 + TSS region transcription start site region 79249
Cpgi20973 8 106507690 to 106508197 507 CpG island CpG island 20973
Cpgi20974 8 106510538 to 106512086 1548 CpG island CpG island 20974
Cdh3 8 106510852 to 106556911 46059 + protein coding gene cadherin 3
Tssr79250 8 106510853 to 106510924 71 + TSS region transcription start site region 79250
Tssr79251 8 106555997 to 106556001 4 + TSS region transcription start site region 79251
Gm10073 8 106572965 to 106573432 467 - pseudogene predicted pseudogene 10073
Cpgi20975 8 106573269 to 106573472 203 CpG island CpG island 20975
Tssr82771 8 106573461 to 106573462 1 - TSS region transcription start site region 82771
1110028F18Rik 8 106587143 to 106594820 7677 + lincRNA gene RIKEN cDNA 1110028F18 gene
Gm39239 8 106592673 to 106595192 2519 - lncRNA gene predicted gene, 39239
Cpgi20976 8 106602950 to 106604489 1539 CpG island CpG island 20976
Cdh1 8 106603351 to 106670246 66895 + protein coding gene cadherin 1
Tssr79252 8 106603360 to 106603374 14 + TSS region transcription start site region 79252
Tssr79253 8 106604251 to 106604262 11 + TSS region transcription start site region 79253
Tssr79254 8 106636289 to 106636295 6 + TSS region transcription start site region 79254
Tssr79255 8 106653584 to 106653595 11 + TSS region transcription start site region 79255
Tssr79256 8 106659648 to 106659665 17 + TSS region transcription start site region 79256
Tssr79257 8 106660920 to 106660931 11 + TSS region transcription start site region 79257
Tssr79258 8 106660944 to 106661001 57 + TSS region transcription start site region 79258
Tssr79259 8 106663883 to 106663901 18 + TSS region transcription start site region 79259
Tssr79260 8 106668612 to 106668629 17 + TSS region transcription start site region 79260
Tssr79261 8 106668723 to 106668752 29 + TSS region transcription start site region 79261
Tssr79262 8 106668754 to 106668791 37 + TSS region transcription start site region 79262
Tssr79263 8 106668812 to 106668828 16 + TSS region transcription start site region 79263