Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:106277229-106340754

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smpd3 8 106252548 to 106337988 85440 - protein coding gene sphingomyelin phosphodiesterase 3, neutral
Tssr82761 8 106280965 to 106281008 43 - TSS region transcription start site region 82761
Tssr82762 8 106281012 to 106281031 19 - TSS region transcription start site region 82762
Tssr82763 8 106281044 to 106281058 14 - TSS region transcription start site region 82763
Tssr82764 8 106281060 to 106281073 13 - TSS region transcription start site region 82764
Tssr82765 8 106282147 to 106282161 14 - TSS region transcription start site region 82765
4930506A18Rik 8 106282229 to 106335754 53525 + lncRNA gene RIKEN cDNA 4930506A18 gene
Tssr79242 8 106282240 to 106282247 7 + TSS region transcription start site region 79242
Tssr79243 8 106282249 to 106282258 9 + TSS region transcription start site region 79243
Tssr82766 8 106283213 to 106283216 3 - TSS region transcription start site region 82766
Gm10629 8 106283307 to 106300017 16710 + lincRNA gene predicted gene 10629
Tssr82767 8 106288826 to 106288831 5 - TSS region transcription start site region 82767
Tssr79244 8 106305225 to 106305229 4 + TSS region transcription start site region 79244
Tssr79245 8 106329241 to 106329247 6 + TSS region transcription start site region 79245
Cpgi20970 8 106336395 to 106337396 1001 CpG island CpG island 20970
Cpgi20971 8 106337565 to 106338506 941 CpG island CpG island 20971
Tssr82768 8 106337929 to 106337980 51 - TSS region transcription start site region 82768
Tssr82769 8 106337987 to 106337996 9 - TSS region transcription start site region 82769
Tssr82770 8 106337997 to 106338009 12 - TSS region transcription start site region 82770
Gm46051 8 106338007 to 106339454 1447 + lncRNA gene predicted gene, 46051