MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:106165960-106255974

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16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi20968	8	106168266 to 106169703	1437		CpG island	CpG island 20968
Tssr79234	8	106168857 to 106168926	69	+	TSS region	transcription start site region 79234
Slc7a6	8	106168857 to 106198706	29849	+	protein coding gene	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
Slc7a6os	8	106200717 to 106210935	10218	-	protein coding gene	solute carrier family 7, member 6 opposite strand
Tssr79235	8	106201330 to 106201334	4	+	TSS region	transcription start site region 79235
Tssr79236	8	106210144 to 106210151	7	+	TSS region	transcription start site region 79236
Cpgi20969	8	106210306 to 106211585	1279		CpG island	CpG island 20969
Tssr82760	8	106210924 to 106210942	18	-	TSS region	transcription start site region 82760
Tssr79237	8	106210960 to 106210974	14	+	TSS region	transcription start site region 79237
Tssr79238	8	106210993 to 106211011	18	+	TSS region	transcription start site region 79238
Tssr79239	8	106211016 to 106211043	27	+	TSS region	transcription start site region 79239
Prmt7	8	106211054 to 106251694	40640	+	protein coding gene	protein arginine N-methyltransferase 7
Gm26786	8	106237903 to 106425728	187825	-	lincRNA gene	predicted gene, 26786
Tssr79240	8	106243277 to 106243285	8	+	TSS region	transcription start site region 79240
Tssr79241	8	106243300 to 106243311	11	+	TSS region	transcription start site region 79241
Smpd3	8	106252548 to 106337988	85440	-	protein coding gene	sphingomyelin phosphodiesterase 3, neutral